Evidence map›Paper›PMID 21326601›Full record

ArticlePloS one2011

Genetic variation in spatio-temporal confined USA300 community-associated MRSA isolates: a shift from clonal dispersion to genetic evolution?

Neeltje Carpaij, Rob J L Willems, Thomas W Rice, Robert A Weinstein, Jason Hinds, Adam A Witney, Jodi A Lindsay, Marc J M Bonten, Ad C Fluit

Abstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Microorganisms · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Neeltje CarpaijDepartment of Medical Microbiology, University Medical Centre Utrecht, Utrecht, The Netherlands. N.Carpaij-2@umcutrecht.nl
Rob J L Willems
Thomas W Rice
Robert A Weinstein
Jason Hinds
Adam A Witney
Jodi A Lindsay
Marc J M Bonten
Ad C Fluit

Funding

Wellcome Trust 086547
6 · The paper itself

Abstract

introductionCommunity-associated methicillin-resistant Staphylococcus aureus (CA-MRSA) are increasingly isolated, with USA300-0114 being the predominant clone in the USA. Comparative whole genome sequencing of USA300 isolates collected in 2002, 2003 and 2005 showed a limited number of single nucleotide polymorphisms and regions of difference. This suggests that USA300 has undergone rapid clonal expansion without great genomic diversification. However, whole genome comparison of CA-MRSA has been limited to isolates belonging to USA300. The aim of this study was to compare the genetic repertoire of different CA-MRSA clones with that of HA-MRSA from the USA and Europe through comparative genomic hybridization (CGH) to identify genetic clues that may explain the successful and rapid emergence of CA-MRSA. MATERIALS AND

methodsHierarchical clustering based on CGH of 48 MRSA isolates from the community and nosocomial infections from Europe and the USA revealed dispersed clustering of the 19 CA-MRSA isolates. This means that these 19 CA-MRSA isolates do not share a unique genetic make-up. Only the PVL genes were commonly present in all CA-MRSA isolates. However, 10 genes were variably present among 14 USA300 isolates. Most of these genes were present on mobile elements.

conclusionThe genetic variation present among the 14 USA300 isolates is remarkable considering the fact that the isolates were recovered within one month and originated from a confined geographic area, suggesting continuous evolution of this clone.

Indexed as

Evolution, MolecularGenetic VariationClone CellsCluster AnalysisCommunity-Acquired InfectionsComparative Genomic HybridizationCross InfectionEuropeGene FrequencyGeographyHumansMethicillin-Resistant Staphylococcus aureusMolecular EpidemiologyResidence CharacteristicsStaphylococcal InfectionsTime Factors

Identifiers

PMID21326601
PMCPMC3033884

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