Evidence map›Paper›PMID 21326214›Full record

ArticleThe EMBO journal2011

Evidence that metabolism and chromosome copy number control mutually exclusive cell fates in Bacillus subtilis.

Yunrong Chai, Thomas Norman, Roberto Kolter, Richard Losick

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 77 citations in OpenAlex.

  1. Review
  2. Article
  3. Proceedings of the National Academy of Sciences of the United States of America · 2025
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  7. Review
  8. Microorganisms · 2022
    Review
  9. Article
  10. Article
  11. Article
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  13. Article
  14. Article
  15. The Adaptive Morphology ofMicroorganisms · 2019
    Article
  16. Biofilms Positively Contribute toInternational journal of molecular sciences · 2019
    Article
  17. Article
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  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Yunrong ChaiDepartment of Molecular and Cellular Biology, Harvard University, Cambridge, MA 02138, USA.
Thomas Norman
Roberto Kolter
Richard Losick
Harvard University · US

Funding

Role of RNA Polymerase in Bacterial DifferentionR01GM018568 · NIGMS · HARVARD UNIVERSITY · PI LOSICK, RICHARD MARC · 1985 to 2018
$11.5M
MOLECULAR GENETICS OF BIOFILM FORMATIONR01GM058213 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI RUDNER, DAVID Z · 1998 to 2017
$7.5M
DEVELOPMENT OF A NOVEL DRUG DELIVERY SYSTEMF31GM018546 · NIGMS · PURDUE UNIVERSITY WEST LAFAYETTE · PI QUALLS, MARQUITA M · 1996 to 1999
–
NIGMS NIH HHS F31 GM018546NIGMS NIH HHS GM18546NIGMS NIH HHS GM58213NIGMS NIH HHS R01 GM018568NIGMS NIH HHS R01 GM058213
6 · The paper itself

Abstract

Bacillus subtilis chooses between matrix production and spore formation, which are both controlled by the regulator Spo0A~P. We report that metabolism and chromosome copy number dictate which fate is adopted. Conditions that favour low Spo0A~P levels promote matrix production, whereas conditions favouring high levels trigger sporulation. Spo0A~P directs the synthesis of SinI, an antirepressor for the SinR repressor of matrix genes. The regulatory region of sinI contains an activator site that Spo0A~P binds strongly and operators that bind Spo0A~P weakly. Evidence shows that low Spo0A~P levels turn sinI ON and high levels turn sinI OFF and instead switch sporulation ON. Cells in which sinI and sinR were transplanted from their normal position near the chromosome replication terminus to positions near the origin and cells that harboured an extra copy of the genes were blocked in matrix production. Thus, matrix gene expression is sensitive to the number of copies of sinI and sinR. Because cells at the start of sporulation have two chromosomes and matrix-producing cells one, chromosome copy number could contribute to cell-fate determination.

Indexed as

Chromosomes, BacterialGene Expression RegulationBacillus subtilisBacterial ProteinsDNA, BacterialGene DosageProtein BindingSpores, BacterialTranscription FactorsBacterial ProteinsDNA, BacterialFlaD protein, BacteriaSinI protein, Bacillus subtilisTranscription Factors

Identifiers

PMID21326214
PMCPMC3094124
OpenAlexW2116886737

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.