Evidence map›Paper›PMID 21325292›Full record

ArticleClinical cancer research : an official journal of the American Association for Cancer Research2011

Rapid diagnosis of medulloblastoma molecular subgroups.

Ed C Schwalbe, Janet C Lindsey, Debbie Straughton, Twala L Hogg, Michael Cole, Hisham Megahed, Sarra L Ryan, Meryl E Lusher, Michael D Taylor, Richard J Gilbertson and 3 more

Registry-linked trialOpen access · bronzeAbstract read
In one paragraph

Article in Clinical cancer research : an official journal of the American Association for Cancer Research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT01601184 (An International, Randomized, Open-label Phase I/II Study of Vismodegib in Combination With Temozolomide Versus Temozolomide Alone in Adult Patients With Recurrent or Refractory Medulloblastomas Presenting an Activation of the Sonic Hedgehog), which is not on this map. Cited by 41 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed, 1 pooled it
5.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT01601184 phase1 / phase2terminatednot on this mapstarted 2012, after this paper: background citation

An International, Randomized, Open-label Phase I/II Study of Vismodegib in Combination With Temozolomide Versus Temozolomide Alone in Adult Patients With Recurrent or Refractory Medulloblastomas Presenting an Activation of the Sonic Hedgehog (SHH) Pathway

TypeinterventionalSponsorCentre Leon BerardRan2012 to 2017Enrolled24ConditionsHistologically Confirmed Medulloblastoma, Activation of the Sonic Hedgehog (SHH) PathwayArmsvismodegib, Temozolomide
3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 1 synthesis or guideline pooled it, 80 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Review
  6. Effects of different molecular subtypes and tumor biology on the prognosis of medulloblastoma.Child's nervous system : ChNS : official journal of the International Society for Pediatric Neurosurgery · 2021
    Article
  7. Article
  8. Review
  9. Use of Genome-Scale Integrated Analysis to Identify Key Genes and Potential Molecular Mechanisms in Recurrence of Lower-Grade Brain Glioma.Medical science monitor : international medical journal of experimental and clinical research · 2019
    Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Tumor-associated macrophages in SHH subgroup of medulloblastomas.Clinical cancer research : an official journal of the American Association for Cancer Research · 2015
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 3 countries.

Ed C SchwalbeNorthern Institute for Cancer Research, Newcastle University, Newcastle upon Tyne, UK.
Janet C Lindsey
Debbie Straughton
Twala L Hogg
Michael Cole
Hisham Megahed
Sarra L Ryan
Meryl E Lusher
Michael D Taylor
Richard J Gilbertson
David W Ellison
Simon Bailey
Steven C Clifford
Newcastle University · GBBrain Tumour Research · GBHospital for Sick Children · CASt. Jude Children's Research Hospital · USSickKids Foundation · CA

Funding

An Investigation of Radial Glia as the Source of Ependymoma Stem CellsR01CA129541 · NCI · UNIVERSITY OF CAMBRIDGE · PI GILBERTSON, RICHARD · 2007 to 2016
$3.0M
Cancer Research UK A5497NCI NIH HHS R01 CA129541
6 · The paper itself

Abstract

purposeMicroarray studies indicate medulloblastoma comprises distinct molecular disease subgroups, which offer potential for improved clinical management. EXPERIMENTAL

designMinimal mRNA expression signatures diagnostic for the Wnt/Wingless (WNT) and Sonic Hedgehog (SHH) subgroups were developed, validated, and used to assign subgroup affiliation in 173 tumors from four independent cohorts, alongside a systematic investigation of subgroup clinical and molecular characteristics.

resultsWNT tumors [12% (21/173)] were diagnosed >5 years of age (peak, 10 years), displayed classic histology, CTNNB1 mutation (19/20), and associated chromosome 6 loss, and have previously been associated with favorable prognosis. SHH cases [24% (42/173)] predominated in infants (<3 years) and showed an age-dependent relationship to desmoplastic/nodular pathology; all infant desmoplastic/nodular cases (previously associated with a good outcome) were SHH-positive, but these relationships broke down in noninfants. PTCH1 mutations were common [34% (11/32)], but PTCH1 exon1c hypermethylation, chromosome 9q and REN (KCTD11) genetic loss were not SHH associated, and SMO or SUFU mutation, PTCH1 exon1a or SUFU hypermethylation did not play a role, indicating novel activating mechanisms in the majority of SHH cases. SHH tumors were associated with an absence of COL1A2 methylation. WNT/SHH-independent medulloblastomas [64% (110/173)] showed all histologies, peaked at 3 and 6 years, and were exclusively associated with chromosome 17p loss.

conclusionsMedulloblastoma subgroups are characterized by distinct genomic, epigenomic and clinicopathologic features, and clinical outcomes. Validated array-independent gene expression assays for the rapid assessment of subgroup affiliation in small biopsies provide a basis for their routine clinical application, in strategies including molecular disease-risk stratification and delivery of targeted therapeutics.

Indexed as

Gene Expression ProfilingAdolescentAdultAge Factorsbeta CateninCarcinoma, Large CellCase-Control StudiesCerebellar NeoplasmsChildChild, PreschoolChromosomes, Human, Pair 17Chromosomes, Human, Pair 9Cluster AnalysisEpigenesis, GeneticFemaleHedgehog Proteinsbeta CateninCTNNB1 protein, humanHedgehog ProteinsPatched-1 ReceptorPatched ReceptorsPTCH1 protein, humanReceptors, Cell SurfaceRNA, MessengerSHH protein, humanWnt Proteins

Identifiers

PMID21325292
PMCPMC3071325
OpenAlexW2051976171

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.