Evidence map›Paper›PMID 21321670›Full record

ArticleMolecular vision2011

Chromosome 7q31 POAG locus: ocular expression of caveolins and lack of association with POAG in a US cohort.

Markus H Kuehn, Kai Wang, Ben Roos, Edwin M Stone, Young H Kwon, Wallace L M Alward, Robert F Mullins, John H Fingert

Open access · greenAbstract read
In one paragraph

Article in Molecular vision, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Review
  6. Review
  7. Article
  8. Article
  9. Review
  10. Review
  11. Caveolins and caveolae in ocular physiology and pathophysiology.Progress in retinal and eye research · 2017
    Review
  12. Tank-Binding Kinase 1 (Transactions of the American Ophthalmological Society · 2016
    Article
  13. Article
  14. An Updated Review on the Genetics of Primary Open Angle Glaucoma.International journal of molecular sciences · 2015
    Review
  15. Article
  16. Induction of trabecular meshwork cells from induced pluripotent stem cells.Investigative ophthalmology & visual science · 2014
    Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Markus H KuehnDepartment of Ophthalmology, The University of Iowa College of Medicine, Iowa City, IA 52242, USA.
Kai Wang
Ben Roos
Edwin M Stone
Young H Kwon
Wallace L M Alward
Robert F Mullins
John H Fingert
University of Iowa · US

Funding

Genetics of Quantitative Traits Associated with GlaucomaR01EY018825 · NEI · UNIVERSITY OF IOWA · PI FINGERT, JOHN H · 2009 to 2013
$3.2M
The Role of Complement System in GlaucomaR01EY019485 · NEI · UNIVERSITY OF IOWA · PI KUEHN, MARKUS H. · 2009 to 2012
$1.5M
The Molecular Genetics of Pigmentary GlaucomaK08EY017698 · NEI · UNIVERSITY OF IOWA · PI FINGERT, JOHN H · 2006 to 2010
$786k
NEI NIH HHS K08 EY017698NEI NIH HHS K08EY017698NEI NIH HHS R01 EY018825NEI NIH HHS R01EY018825NEI NIH HHS R01 EY019485NEI NIH HHS R01EY019485
6 · The paper itself

Abstract

purposeTo determine the role of the recently discovered primary open angle glaucoma (POAG) risk factor mapped to chromosome 7q31 in glaucoma patients from Iowa and to determine the expression pattern of genes in the locus in human eyes.

methodsA cohort of 545 POAG patients and 297 control subjects from Iowa were genotyped with a single nucleotide polymorphism (SNP; rs4236601) in the chromosome 7q31 locus using a quantitative polymerase chain reaction (PCR) assay. The expression of genes within the 7q31 locus, caveolin-1 (CAV1) and caveolin-2 (CAV2) in human eyes was investigated with immunohistochemistry.

resultsThe minor allele frequency (MAF) of rs4236601 was 27% in control subjects and 29% in POAG patients. We detected no statistical difference when we compared the allele frequencies of rs4236601 between POAG patients and control subjects (p=0.5). Similarly, we detected no statistical difference in the frequency of the three possible rs4236601 genotypes between patients and controls (p=0.22). Immunohistochemistry showed caveolin expression in human retina, ciliary muscle, trabecular meshwork, and Schlemm's canal. In our small cohort of donor eyes, the genotype of rs4236601 did not obviously influence labeling intensity or distribution of CAV1 and CAV2 in the retina.

conclusionsA genome-wide association study of subjects from Iceland mapped the first common genetic risk factor for POAG to a small region of the genome on chromosome 7q31 that contains the caveolin genes CAV1 and CAV2. We were unable to detect this association in our patients from Iowa, suggesting that this risk factor may not have a strong effect in all populations.

Indexed as

Chromosomes, Human, Pair 7AllelesCaveolin 1Caveolin 2Cohort StudiesGene FrequencyGenotypeGlaucoma, Open-AngleHumansImmunohistochemistryModels, StatisticalPolymerase Chain ReactionPolymorphism, Single NucleotideRisk FactorsUnited StatesCaveolin 1Caveolin 2

Identifiers

PMID21321670
PMCPMC3038208
OpenAlexW2144633001

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.