Evidence map›Paper›PMID 21321396›Full record

SynthesisJournal of Alzheimer's disease : JAD2011

Replication of BIN1 association with Alzheimer's disease and evaluation of genetic interactions.

Minerva M Carrasquillo, Olivia Belbin, Talisha A Hunter, Li Ma, Gina D Bisceglio, Fanggeng Zou, Julia E Crook, V Shane Pankratz, Sigrid B Sando, Jan O Aasly and 7 more

Abstract readComparative StudyEvaluation StudyMeta-Analysis
In one paragraph

Synthesis in Journal of Alzheimer's disease : JAD, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers, 5 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed, 5 pooled it
4.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 5 syntheses or guidelines pooled it, 61 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. Pooled it
  6. Article
  7. Article
  8. Article
  9. Article
  10. Lack of association between bridging integrator 1 (Alzheimer's & dementia (New York, N. Y.) · 2022
    Article
  11. Association Analysis of Polymorphisms inNeuropsychiatric disease and treatment · 2021
    Article
  12. Article
  13. Article
  14. Association of GWAS Top Genes With Late-Onset Alzheimer's Disease in Colombian Population.American journal of Alzheimer's disease and other dementias · 2017
    Article
  15. Genomic variants, genes, and pathways of Alzheimer's disease: An overview.American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics · 2017
    Review
  16. Article
  17. Article
  18. Review
  19. Potential contribution of the Alzheimer's disease risk locus BIN1 to episodic memory performance in cognitively normal Type 2 diabetes elderly.European neuropsychopharmacology : the journal of the European College of Neuropsychopharmacology · 2016
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 7 institutions in 4 countries.

Minerva M CarrasquilloDepartment of Neuroscience, Mayo Clinic College of Medicine, Jacksonville, FL 32224 , USA.
Olivia Belbin
Talisha A Hunter
Li Ma
Gina D Bisceglio
Fanggeng Zou
Julia E Crook
V Shane Pankratz
Sigrid B Sando
Jan O Aasly
Maria Barcikowska
Zbigniew K Wszolek
Dennis W Dickson
Neill R Graff-Radford
Ronald C Petersen
Kevin Morgan
Steven G Younkin
Jacksonville College · USMayo Clinic in Florida · USMayo Clinic · USUniversity of Nottingham · GBNorwegian University of Science and Technology · NOPolish Academy of Sciences · PLSt Olav's University Hospital · NO

Funding

National Centralized Repository for Alzheimer's Disease and Related Dementias (NCRAD)U24AG021886 · NIA · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI TATIANA M. FOROUD · 2002 to 2026
$119.8M
Vascular Structure and Function in Cognitive AgingP01AG003949 · NIA · YESHIVA UNIVERSITY · PI Richard B. LIPTON · 1985 to 2026
$73.9M
SUPPLEMENT TO ALZHEIMERS DISEASE PATIENT REGISTRYU01AG006786 · NIA · MAYO CLINIC ROCHESTER · PI GRAFF-RADFORD, JONATHAN, JACK, CLIFFORD R. · 1986 to 2023
$49.6M
THE PGRN/TDP-43 AXIS IN ALZHEIMER?S DISEASE AND NEURODEGENERATIONP50AG016574 · NIA · MAYO CLINIC ROCHESTER · PI BU, GUOJUN · 1999 to 2018
$36.9M
TRANSGENIC MODELING OF TAUOPATHYP01AG017216 · NIA · MAYO CLINIC JACKSONVILLE · PI DICKSON, DENNIS WILLIAM · 1999 to 2011
$12.0M
Neuropathology CoreP50NS072187 · NINDS · MAYO CLINIC JACKSONVILLE · PI DICKSON, DENNIS WILLIAM · 2010 to 2017
$8.7M
PREDICTORS OF THE RATE OF COGNITIVE DECLINE IN ELDERLY SUBJECTSP50AG025711 · NIA · UNIVERSITY OF SOUTH FLORIDA · PI POTTER, HUNTINGTON · 2005 to 2010
$8.2M
PD iPS Cell Line Research ConsortiumRC2NS070276 · NINDS · MCLEAN HOSPITAL · PI ISACSON, OLE · 2009 to 2010
$3.8M
PLASMA A BETA AS A SURROGATE GENETIC MARKER FOR LOADR01AG018023 · NIA · MAYO CLINIC JACKSONVILLE · PI YOUNKIN, STEVEN G · 2001 to 2012
$3.3M
Biomarkers for Preclinical Parkinson's diseaseR01NS057567 · NINDS · UNIVERSITY OF WASHINGTON · PI ZHANG, JING · 2008 to 2012
$3.1M
NIA NIH HHS AG03949NIA NIH HHS AG17216NIA NIH HHS AG25711NIA NIH HHS P01 AG003949NIA NIH HHS P01 AG017216NIA NIH HHS P50 AG016574NIA NIH HHS P50 AG025711NIA NIH HHS P50 AG16574NIA NIH HHS R01 AG018023NIA NIH HHS R01 AG18023NIA NIH HHS U01 AG006786NIA NIH HHS U01 AG06576NIA NIH HHS U24 AG021886NIA NIH HHS U24AG21886NINDS NIH HHS 1RC2NS070276NINDS NIH HHS NS057567NINDS NIH HHS P50 NS072187NINDS NIH HHS P50NS072187NINDS NIH HHS R01 NS057567NINDS NIH HHS RC2 NS070276
6 · The paper itself

Abstract

The most recent late-onset Alzheimer's disease (LOAD) genome-wide association study revealed genome-wide significant association of two new loci: rs744373 near BIN1 (p = 1.6 × 10-11) and rs597668 near EXOC3L2/BLOC1S3/MARK4 (p = 6.5 × 10-9). We have genotyped these variants in a large (3,287 LOAD, 4,396 controls), independent dataset comprising eleven case-control series from the USA and Europe. We performed meta-analyses of the association of these variants with LOAD and also tested for association using logistic regression adjusted by age-at-diagnosis, gender, and APOE ε4 status. Meta-analysis results showed no evidence of series heterogeneity and logistic regression analysis successfully replicated the association of BIN1 (rs744373) with LOAD with an odds ratio (OR = 1.17, p = 1.1 × 10-4) comparable to that previously reported (OR = 1.15). The variant near EXOC3L2 (rs597668) showed only suggestive association with LOAD (p = 0.09) after correcting for the presence of the APOE ε4 allele. Addition of our follow-up data to the results previously reported increased the strength of evidence for association with BIN1 (11,825 LOAD, 32,570 controls, rs744373 Fisher combined p = 3.8 × 10-20). We also tested for epistatic interaction between these variants and APOE ε4 as well as with the previously replicated LOAD GWAS genes (CLU: rs11136000, CR1: rs3818361, and PICALM: rs3851179). No significant interactions between these genes were detected. In summary, we provide additional evidence for the variant near BIN1 (rs744373) as a LOAD risk modifier, but our results indicate that the effect of EXOC3L2 independent of APOE ε4 should be studied further.

Indexed as

Adaptor Proteins, Signal TransducingAlzheimer DiseaseCase-Control StudiesGenetic VariationGenome-Wide Association StudyHumansLogistic ModelsNuclear ProteinsOdds RatioTumor Suppressor ProteinsAdaptor Proteins, Signal TransducingBIN1 protein, humanNuclear ProteinsTumor Suppressor Proteins

Identifiers

PMID21321396
PMCPMC3489170
OpenAlexW1837238469

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.