Evidence map›Paper›PMID 21321209›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2011

Alloreactivity is limited by the endogenous peptide repertoire.

Gerald P Morris, Peggy P Ni, Paul M Allen

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 40 citations in OpenAlex.

  1. Review
  2. Unraveling CD8American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons · 2025
    Review
  3. Review
  4. Allorecognition Unveiled: Integrating Recent Breakthroughs Into the Current Paradigm.Transplant international : official journal of the European Society for Organ Transplantation · 2024
    Review
  5. Article
  6. The role of self-peptides in direct T cell allorecognition.The Journal of clinical investigation · 2021
    Article
  7. Review
  8. Article
  9. Alloimmune T cells in transplantation.The Journal of clinical investigation · 2017
    Review
  10. Class II major histocompatibility complex mutant mice to study the germ-line bias of T-cell antigen receptors.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  11. Low-Affinity Memory CD8+ T Cells Mediate Robust Heterologous Immunity.Journal of immunology (Baltimore, Md. : 1950) · 2016
    Article
  12. Article
  13. Generation of human alloantigen-specific T cells from peripheral blood.Journal of visualized experiments : JoVE · 2014
    Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Gerald P MorrisDepartment of Pathology and Immunology, Washington University, St. Louis, MO 63110, USA.
Peggy P Ni
Paul M Allen
Washington University in St. Louis · US

Funding

TRAINING PROGRAM IN IMMUNOLOGY AND IMMUNOGENETICST32AI007163 · NIAID · WASHINGTON UNIVERSITY · PI Kenneth M Murphy, Kodi S Ravichandran · 1985 to 2026
$14.8M
RECOGNITION AND SIGNALING IN POSITIVE SELECTION OF CD4+ T CELLSR01AI024157 · NIAID · WASHINGTON UNIVERSITY · PI ALLEN, PAUL M · 1987 to 2016
$2.5M
T Cell Recognition of Allogeneic Peptide/MHC LigandsR01AI061173 · NIAID · WASHINGTON UNIVERSITY · PI ALLEN, PAUL M · 2005 to 2009
$1.8M
Investigation of the Molecular Basis of T Cell AlloreactivityK08AI085039 · NIAID · WASHINGTON UNIVERSITY · PI MORRIS, GERALD PATRICK · 2010 to 2014
$531k
T CELL RECOGNITION OF ALLOGENEIC PEPTIDE/MHC LIGANDSR56AI061173 · NIAID · WASHINGTON UNIVERSITY · PI ALLEN, PAUL M · 2010 to 2010
$380k
NIAID NIH HHS AI-061173NIAID NIH HHS K08 AI085039NIAID NIH HHS L40 AI080244NIAID NIH HHS R01 AI024157NIAID NIH HHS R01 AI061173NIAID NIH HHS R56 AI061173NIAID NIH HHS T32 AI007163
6 · The paper itself

Abstract

A significant portion of the naive T-cell repertoire is capable of responding to allogeneic MHC, violating the paradigm of self-MHC restriction. Recent studies have demonstrated convincing evidence for germ-line affinity of T-cell receptors (TCR) for MHC, providing explanation for recognition of MHC not encountered during thymic development. However, although germ-line affinity proposes all TCR have inherent affinity for MHC, most T cells are not alloreactive to a given MHC. We propose that specific recognition of endogenous presented peptides, rather than inability to interact with allogeneic MHC molecules, is the primary determinant of alloreactivity. Here, we demonstrate that alloreactive and nonalloreactive TCR differ specifically in the CDR3 sequences responsible primarily for the peptide specificity of T-cell recognition. Limitations on alloreactivity imposed by a requirement for recognition of presented peptides are directly demonstrated by expansion of the alloreactive T-cell repertoire through the addition of peptide mimotopes enabling response to two distinct allogeneic MHC by otherwise nonalloreactive T cells. Responses to peptide mimotopes were specific and depended on TCR interaction with MHC. These results demonstrate that recognition of presented endogenous peptides, and not the inability to interact with allogeneic MHC, is the primary limiter on alloreactivity. This observation reconciles the concept of an inherently MHC-reactive TCR repertoire with observed frequencies of T cells responding to allogeneic stimulation and underscores the fundamental nature of TCR recognition of ligands, where both MHC and presented peptides contribute critically to T-cell recognition.

Indexed as

Amino Acid SequenceAnimalsAntigen PresentationComplementarity Determining RegionsHistocompatibility AntigensMiceModels, ImmunologicalModels, MolecularMolecular Sequence DataPeptidesReceptors, Antigen, T-CellT-LymphocytesComplementarity Determining RegionsHistocompatibility AntigensPeptidesReceptors, Antigen, T-Cell

Identifiers

PMID21321209
PMCPMC3048116
OpenAlexW1976727062

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.