Evidence map›Paper›PMID 21320475›Full record

ArticleChemistry and physics of lipids2011

Conjugated double bonds in lipid bilayers: a molecular dynamics simulation study.

Guijun Zhao, P V Subbaiah, See-Wing Chiu, Eric Jakobsson, H L Scott

Abstract read
In one paragraph

Article in Chemistry and physics of lipids, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 10 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

Guijun ZhaoDepartment of Biological, Chemical, and Physical Sciences, Illinois Institute of Technology, Chicago, 60616, United States.
P V Subbaiah
See-Wing Chiu
Eric Jakobsson
H L Scott
Illinois Institute of Technology · USNational Center for Supercomputing Applications · BGUniversity of Illinois Chicago · USUniversity of Illinois Urbana-Champaign · US

Funding

NATIONAL CENTER FOR DESIGN:BIOMIMETIC NANOCONDUCTOR(RMI)PN2EY016570 · NEI · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI JAKOBSSON, ERIC G · 2005 to 2009
$6.6M
ROLE OF SPHINGOMYELIN IN LIPOPROTEIN METABOLISMR01HL068585 · NHLBI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI SUBBAIAH, PAPASANI V · 2002 to 2012
$3.3M
Physiological Significance of Conjugated Double Bonds in Membrane LipidsR21DK078165 · NIDDK · UNIVERSITY OF ILLINOIS AT CHICAGO · PI SUBBAIAH, PAPASANI V · 2008 to 2009
$432k
Role of Sphingomyelin in Lipoprotein MetabolismR56HL068585 · NHLBI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI SUBBAIAH, PAPASANI V · 2008 to 2008
$393k
Center for Design:Biomimetic Nanoconductors (RMI)PN1EY016570 · NEI · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI JAKOBSSON, ERIC G · 2004 to 2004
$66k
NEI NIH HHS 2 PN2 EY016570BNEI NIH HHS PN1 EY016570NEI NIH HHS PN2 EY016570NHLBI NIH HHS HL 68585NHLBI NIH HHS R01 HL068585NHLBI NIH HHS R56 HL068585NIDDK NIH HHS DK78165NIDDK NIH HHS R21 DK078165
6 · The paper itself

Abstract

Conjugated linoleic acids (CLA) are found naturally in dairy products. Two isomers of CLA, that differ only in the location of cis and trans double bonds, are found to have distinct and different biological effects. The cis 9 trans 11 (C9T11) isomer is attributed to have the anti-carcinogenic effects, while the trans 10 cis 12 (T10C12) isomer is believed to be responsible for the anti-obesity effects. Since dietary CLA are incorporated into membrane phospholipids, we have used Molecular Dynamics (MD) simulations to investigate the comparative effects of the two isomers on lipid bilayer structure. Specifically, simulations of phosphatidylcholine lipid bilayers in which the sn-2 chains contained one of the two isomers of CLA were performed. Force field parameters for the torsional potential of double bonds were obtained from ab initio calculations. From the MD trajectories we calculated and compared structural properties of the two lipid bilayers, including areas per molecule, density profiles, thickness of bilayers, tilt angle of tail chains, order parameters profiles, radial distribution function (RDF) and lateral pressure profiles. The main differences found between bilayers of the two CLA isomers, are (1) the order parameter profile for C9T11 has a dip in the middle of sn-2 chain while the profile for T10C12 has a deeper dip close to terminal of sn-2 chain, and (2) the lateral pressure profiles show differences between the two isomers. Our simulation results reveal localized physical structural differences between bilayers of the two CLA isomers that may contribute to different biological effects through differential interactions with membrane proteins or cholesterol.

Indexed as

Molecular Dynamics SimulationLinoleic AcidsLipid BilayersMolecular StructureLinoleic AcidsLipid Bilayers

Identifiers

PMID21320475
PMCPMC3062165
OpenAlexW2094100104

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.