Evidence map›Paper›PMID 21320344›Full record

ArticleBMC medical genetics2011

Evaluation of genetic susceptibility to childhood allergy and asthma in an African American urban population.

Bonnie R Joubert, David M Reif, Stephen W Edwards, Kevin A Leiner, Edward E Hudgens, Peter Egeghy, Jane E Gallagher, Elaine Cohen Hubal

Open access · goldAbstract readEvaluation Study
In one paragraph

Article in BMC medical genetics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
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  4. Antioxidant-Rich Diet,Frontiers in oncology · 2020
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  6. Lack of association between glutathione s-transferase mu 1 (Journal of exercise rehabilitation · 2017
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  8. Review
  9. Article
  10. Article
  11. Article
  12. Role of GSTM1 in resistance to lung inflammation.Free radical biology & medicine · 2012
    Review
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  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Bonnie R JoubertUS Environmental Protection Agency (EPA), National Exposure Research Laboratory, Durham, NC, USA. brjoubert@gmail.com
David M Reif
Stephen W Edwards
Kevin A Leiner
Edward E Hudgens
Peter Egeghy
Jane E Gallagher
Elaine Cohen Hubal
National Center for Environmental Health · USEnvironmental Protection Agency · USIntegrated Laboratory Systems, Inc. · USNational Institutes of Health · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAsthma and allergy represent complex phenotypes, which disproportionately burden ethnic minorities in the United States. Strong evidence for genomic factors predisposing subjects to asthma/allergy is available. However, methods to utilize this information to identify high risk groups are variable and replication of genetic associations in African Americans is warranted.

methodsWe evaluated 41 single nucleotide polymorphisms (SNP) and a deletion corresponding to 11 genes demonstrating association with asthma in the literature, for association with asthma, atopy, testing positive for food allergens, eosinophilia, and total serum IgE among 141 African American children living in Detroit, Michigan. Independent SNP and haplotype associations were investigated for association with each trait, and subsequently assessed in concert using a genetic risk score (GRS).

resultsStatistically significant associations with asthma were observed for SNPs in GSTM1, MS4A2, and GSTP1 genes, after correction for multiple testing. Chromosome 11 haplotype CTACGAGGCC (corresponding to MS4A2 rs574700, rs1441586, rs556917, rs502581, rs502419 and GSTP1 rs6591256, rs17593068, rs1695, rs1871042, rs947895) was associated with a nearly five-fold increase in the odds of asthma (Odds Ratio (OR) = 4.8, p = 0.007). The GRS was significantly associated with a higher odds of asthma (OR = 1.61, 95% Confidence Interval = 1.21, 2.13; p = 0.001).

conclusionsVariation in genes associated with asthma in predominantly non-African ethnic groups contributed to increased odds of asthma in this African American study population. Evaluating all significant variants in concert helped to identify the highest risk subset of this group.

Indexed as

AdolescentAsthmaBlack or African AmericanChildChromosomes, Human, Pair 11Cross-Sectional StudiesFemaleFood HypersensitivityGenetic Predisposition to DiseaseGlutathione S-Transferase piGlutathione TransferaseHaplotypesHumansHypersensitivityHypersensitivity, ImmediateLinkage DisequilibriumGlutathione S-Transferase piGlutathione TransferaseGSTP1 protein, humanMS4A2 protein, humanReceptors, IgE

Identifiers

PMID21320344
PMCPMC3048491
OpenAlexW1974040739

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.