Evidence map›Paper›PMID 21318880›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2011

Posttranscriptional regulation of ornithine decarboxylase.

Shannon L Nowotarski, Sofia Origanti, Lisa M Shantz

Abstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Shannon L NowotarskiDepartment of Cellular and Molecular Physiology, Milton S. Hershey Medical Center, Pennsylvania State University College of Medicine, Hershey, PA, USA.
Sofia Origanti
Lisa M Shantz
Pennsylvania State University · USPenn State Milton S. Hershey Medical Center · US

Funding

Role of ornithine decarboxylase in Ras transformationR01CA082768 · NCI · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI SHANTZ, LISA M · 1999 to 2006
$1.4M
Epidermal stem cell properties in mice with altered polyaminesR03CA142051 · NCI · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI SHANTZ, LISA M · 2009 to 2010
$155k
NCI NIH HHS R01 CA082768NCI NIH HHS R01 CA82768NCI NIH HHS R03 CA142051
6 · The paper itself

Abstract

Activity of the polyamine biosynthetic enzyme ornithine decarboxylase (ODC) and intracellular levels of ODC protein are controlled very tightly. Numerous studies have described ODC regulation at the levels of transcription, translation, and protein degradation in normal cells and dysregulation of these processes in response to oncogenic stimuli. Although posttranscriptional regulation of ODC has been well documented, the RNA binding proteins (RBPs) that interact with ODC mRNA and control synthesis of the ODC protein have not been defined. Using Ras-transformed rat intestinal epithelial cells (Ras12V cells) as a model, we have begun identifying the RBPs that associate with the ODC transcript. Binding of RBPs could potentially regulate ODC synthesis by either changing mRNA stability or rate of mRNA translation. Techniques for measuring RBP binding and translation initiation are described here. Targeting control of ODC translation or mRNA decay could be a valuable method of limiting polyamine accumulation and subsequent tumor development in a variety of cancers.

Indexed as

Gene Expression Regulation, EnzymologicTranscription, GeneticAnimalsAntibodiesBiological AssayBlotting, NorthernCell ExtractsCells, CulturedCentrifugation, Density GradientImmunoprecipitationMiceMicrospheresMolecular BiologyOrnithine DecarboxylasePolyribosomesRatsAntibodiesCell Extractsmessenger ribonucleoproteinOrnithine DecarboxylaseRibonucleoproteinsRNA, MessengerSepharoseStaphylococcal Protein A

Identifiers

PMID21318880
PMCPMC3590796
OpenAlexW215516326

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.