Evidence map›Paper›PMID 21318282›Full record

ArticleMicrobial ecology2011

Characterization of the active bacterial community involved in natural attenuation processes in arsenic-rich creek sediments.

Odile Bruneel, Aurélie Volant, Sébastien Gallien, Bertrand Chaumande, Corinne Casiot, Christine Carapito, Amélie Bardil, Guillaume Morin, Gordon E Brown, Christian J Personné and 6 more

Abstract read
PubMed Publisher
In one paragraph

Article in Microbial ecology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
6.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 64 citations in OpenAlex.

  1. Prokaryotic communities in the historic silver mine Reiche Zeche.Extremophiles : life under extreme conditions · 2021
    Article
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  12. Proteomic tools to decipher microbial community structure and functioning.Environmental science and pollution research international · 2015
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 7 institutions in 2 countries.

Odile BruneelLaboratoire HydroSciences Montpellier, UMR5569 (CNRS-IRD-Universités Montpellier I et II), Université Montpellier II, CC MSE, Place Eugène Bataillon, 34095 Montpellier Cedex 05, France. bruneel@msem.univ-montp2.fr
Aurélie Volant
Sébastien Gallien
Bertrand Chaumande
Corinne Casiot
Christine Carapito
Amélie Bardil
Guillaume Morin
Gordon E Brown
Christian J Personné
Denis Le Paslier
Christine Schaeffer
Alain Van Dorsselaer
Philippe N Bertin
Françoise Elbaz-Poulichet
Florence Arsène-Ploetze
Institut de Recherche pour le Développement · FRLaboratoire HydroSciences Montpellier · FRUniversité de Strasbourg · FRCentre National de la Recherche Scientifique · FRGénétique Moléculaire Génomique Microbiologie · FRInstitut Pluridisciplinaire Hubert Curien · FRStanford Synchrotron Radiation Lightsource · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Acid mine drainage of the Carnoulès mine (France) is characterized by acid waters containing high concentrations of arsenic and iron. In the first 30 m along the Reigous, a small creek draining the site, more than 38% of the dissolved arsenic was removed by co-precipitation with Fe(III), in agreement with previous studies, which suggest a role of microbial activities in the co-precipitation of As(III) and As(V) with Fe(III) and sulfate. To investigate how this particular ecosystem functions, the bacterial community was characterized in water and sediments by 16S rRNA encoding gene library analysis. Based on the results obtained using a metaproteomic approach on sediments combined with high-sensitivity HPLC-chip spectrometry, several GroEL orthologs expressed by the community were characterized, and the active members of the prokaryotic community inhabiting the creek sediments were identified. Many of these bacteria are β-proteobacteria such as Gallionella and Thiomonas, but γ-proteobacteria such as Acidithiobacillus ferrooxidans and α-proteobacteria such as Acidiphilium, Actinobacteria, and Firmicutes were also detected.

Indexed as

ArsenicBacteriaBiodegradation, EnvironmentalGeologic SedimentsMolecular Sequence DataPhylogenyArsenic

Identifiers

PMID21318282
OpenAlexW1996645327

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.