Evidence map›Paper›PMID 21317898›Full record

ArticleNature structural & molecular biology2011

Genetic selection designed to stabilize proteins uncovers a chaperone called Spy.

Shu Quan, Philipp Koldewey, Tim Tapley, Nadine Kirsch, Karen M Ruane, Jennifer Pfizenmaier, Rong Shi, Stephan Hofmann, Linda Foit, Guoping Ren and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Nature structural & molecular biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 104 papers.

0numbers the graph read from it
0cells of the map it votes in
104citing papers in PubMed
6.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

104 citing papers in PubMed, 172 citations in OpenAlex.

  1. High-throughput analyses ofGut microbes · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. ThemBio · 2026
    Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Frustration in physiology and molecular medicine.Molecular aspects of medicine · 2025
    Review
  12. Mechanisms ofMicroorganisms · 2025
    Article
  13. Article
  14. Article
  15. Making Proteins with Electricity.Reviews of physiology, biochemistry and pharmacology · 2025
    Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article

44 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 2 countries.

Shu QuanHoward Hughes Medical Institute, Chevy Chase, MD, USA.
Philipp Koldewey
Tim Tapley
Nadine Kirsch
Karen M Ruane
Jennifer Pfizenmaier
Rong Shi
Stephan Hofmann
Linda Foit
Guoping Ren
Ursula Jakob
Zhaohui Xu
Miroslaw Cygler
James C A Bardwell
University of Michigan–Ann Arbor · USHoward Hughes Medical Institute · USMcGill University · CA

Funding

CIHR GSP-48370Howard Hughes Medical Institute
6 · The paper itself

Abstract

To optimize the in vivo folding of proteins, we linked protein stability to antibiotic resistance, thereby forcing bacteria to effectively fold and stabilize proteins. When we challenged Escherichia coli to stabilize a very unstable periplasmic protein, it massively overproduced a periplasmic protein called Spy, which increases the steady-state levels of a set of unstable protein mutants up to 700-fold. In vitro studies demonstrate that the Spy protein is an effective ATP-independent chaperone that suppresses protein aggregation and aids protein refolding. Our strategy opens up new routes for chaperone discovery and the custom tailoring of the in vivo folding environment. Spy forms thin, apparently flexible cradle-shaped dimers. The structure of Spy is unlike that of any previously solved chaperone, making it the prototypical member of a new class of small chaperones that facilitate protein refolding in the absence of energy cofactors.

Indexed as

Protein EngineeringCrystallography, X-RayEscherichia coliEscherichia coli ProteinsModels, MolecularMolecular ChaperonesPeriplasmic ProteinsProtein FoldingProtein MultimerizationProtein StabilityRecombinant Fusion ProteinsTanninsUp-RegulationEscherichia coli ProteinsMolecular ChaperonesPeriplasmic ProteinsRecombinant Fusion ProteinsSpy protein, E coliTannins

Identifiers

PMID21317898
PMCPMC3079333
OpenAlexW2140536590

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.