Evidence map›Paper›PMID 21317326›Full record

ArticleJournal of bacteriology2011

Lactococcus lactis ZitR is a zinc-responsive repressor active in the presence of low, nontoxic zinc concentrations in vivo.

Daniel Llull, Olivier Son, Sandrine Blanié, Julien Briffotaux, Eric Morello, Hélène Rogniaux, Olivier Danot, Isabelle Poquet

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Review
  3. Development of ZnSynthetic and systems biotechnology · 2024
    Article
  4. Article
  5. Metallobiology of Lactobacillaceae in the gut microbiome.Journal of inorganic biochemistry · 2023
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Allosteric histidine switch for regulation of intracellular zinc(II) fluctuation.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  11. Review
  12. Stress Physiology of Lactic Acid Bacteria.Microbiology and molecular biology reviews : MMBR · 2016
    Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Daniel LlullINRA, UMR1319 Micalis (Microbiologie de l'Alimentation au Service de la Santé), Bât 222, Domaine de Vilvert, F-78352 Jouy-en-Josas Cedex, France.
Olivier Son
Sandrine Blanié
Julien Briffotaux
Eric Morello
Hélène Rogniaux
Olivier Danot
Isabelle Poquet
Microbiologie de l’alimentation au service de la santé · FRBiopolymères Interactions Assemblages · FRCentre National de la Recherche Scientifique · FRGTP Technology · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the family Streptococcaceae, the genes encoding zinc ABC uptake systems (called zit or adc) are regulated by a coencoded MarR family member (i.e., ZitR or AdcR), whereas in the great majority of bacteria, these genes are regulated by Zur, the Fur-like zinc-responsive repressor. We studied the zit operon from Lactococcus lactis and its regulation in response to Zn(II) in vivo. zit transcription is repressed by Zn(II) in a wide concentration range starting from nontoxic micromolar levels and is derepressed at nanomolar concentrations. The level of zit promoter downregulation by environmental Zn(II) is correlated with the intracellular zinc content. The helix-turn-helix domain of ZitR is required for downregulation. In vitro, the purified protein is a dimer that complexes up to two zinc ligands per monomer and specifically binds two intact palindromic operator sites overlapping the -35 and -10 boxes of the zit promoter. DNA binding is abolished by the chelator EDTA or TPEN and fully restored by Zn(II) addition, indicating that the active repressor complexes Zn(II) with high affinity. These results suggest that derepression under starvation conditions could be an essential emergency mechanism for preserving Zn(II) homeostasis by uptake; under Zn(II)-replete conditions, the function of ZitR repression could be to help save energy rather than to avoid Zn(II) toxicity. The characterization of a MarR family zinc-responsive repressor in this report gives insight into the way Streptococcaceae efficiently adapt to Zn(II) fluctuations in their diverse ecological niches.

Indexed as

Gene Expression Regulation, BacterialAmino Acid SequenceDNA, BacterialElectrophoretic Mobility Shift AssayGene Expression ProfilingHelix-Loop-Helix MotifsLactococcus lactisMolecular Sequence DataOperonPromoter Regions, GeneticProtein Interaction MappingProtein MultimerizationRepressor ProteinsSequence AlignmentZincDNA, BacterialRepressor ProteinsZinc

Identifiers

PMID21317326
PMCPMC3133029
OpenAlexW2132949386

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.