Evidence map›Paper›PMID 21308742›Full record

ArticleJournal of cellular biochemistry2011

Y-box protein-1 is a transcriptional regulator of BMP7.

Shinong Wang, Raimund Hirschberg

Abstract read
In one paragraph

Article in Journal of cellular biochemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Shinong WangLos Angeles Biomedical Research Institute at Harbor-UCLA Medical Center and UCLA, Torrance, California, USA.
Raimund Hirschberg
Harbor–UCLA Medical Center · US

Funding

Prevention of Diabetic Nephropathy by BMP7R21DK063360 · NIDDK · LA BIOMED RES INST/ HARBOR UCLA MED CTR · PI HIRSCHBERG, RAIMUND R · 2003 to 2004
$487k
NIDDK NIH HHS DK63360NIDDK NIH HHS R21 DK063360
6 · The paper itself

Abstract

Bone morphogenetic protein-7 (BMP7) is an endogenous antifibrogenic protein in the kidney which is down regulated in experimental chronic kidney diseases such as obstructive and diabetic nephropathy in parallel with progressively increasing TGFβ. In vitro studies were performed in Madin-Darby Canine Kidney (MDCK)-cells to identify transcriptional regulators of BMP7. Experiments with various BMP7 promoter fragments (465-4,267  bp) identify small proximal promoter segments that are transcriptionally activated by high glucose (3.2-fold) but down regulated by TGFβ (0.2-fold) compared to normal glucose. Protein binding to these DNA segments is increased by high glucose and decreased by TGFβ in a time-dependent, progressive manner. Analysis of BMP7 promoter-binding proteins with liquid chromatography/tandem mass spectrometry (LC/MS/MS) identifies seven unique, partially overlapping peptides, spanning 25% of the amino acid sequence of Y-box protein-1 (YB1). EMSA-Western blot combination experiments confirm that YB1 is a BMP7 promoter-binding protein. YB1 knock-down reduces transcriptional responses to high glucose and TGFβ by about one-half, respectively. In addition, high glucose induces but TGFβ reduces nuclear translocation of YB1 from the cytoplasm. These studies identify YB1 as a transcriptional activator of BMP7 and helps to explain the progressive decline in renal BMP7 in diabetic nephropathy and other kidney diseases.

Indexed as

Amino Acid SequenceAnimalsBlotting, WesternBone Morphogenetic Protein 7Cell LineCold Shock Proteins and PeptidesDogsElectrophoretic Mobility Shift AssayGlucoseMolecular Sequence DataPeptidesPromoter Regions, GeneticProtein BindingRNA InterferenceTrans-ActivatorsTranscription, GeneticBone Morphogenetic Protein 7Cold Shock Proteins and PeptidesGlucosePeptidesTrans-ActivatorsTransforming Growth Factor beta

Identifiers

PMID21308742
PMCPMC3056900
OpenAlexW2099999062

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.