Evidence map›Paper›PMID 21304697›Full record

ArticleStandards in genomic sciences2010

Complete genome sequence of Sulfurospirillum deleyianum type strain (5175).

Johannes Sikorski, Alla Lapidus, Alex Copeland, Tijana Glavina Del Rio, Matt Nolan, Susan Lucas, Feng Chen, Hope Tice, Jan-Fang Cheng, Elizabeth Saunders and 27 more

Abstract read
In one paragraph

Article in Standards in genomic sciences, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

37 authors.

Johannes Sikorski
Alla Lapidus
Alex Copeland
Tijana Glavina Del Rio
Matt Nolan
Susan Lucas
Feng Chen
Hope Tice
Jan-Fang Cheng
Elizabeth Saunders
David Bruce
Lynne Goodwin
Sam Pitluck
Galina Ovchinnikova
Amrita Pati
Natalia Ivanova
Konstantinos Mavromatis
Amy Chen
Krishna Palaniappan
Patrick Chain
Miriam Land
Loren Hauser
Yun-Juan Chang
Cynthia D Jeffries
Thomas Brettin
John C Detter
Cliff Han
Manfred Rohde
Elke Lang
Stefan Spring
Markus Göker
Jim Bristow
Jonathan A Eisen
Victor Markowitz
Philip Hugenholtz
Nikos C Kyrpides
Hans-Peter Klenk

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sulfurospirillum deleyianum Schumacher et al. 1993 is the type species of the genus Sulfurospirillum. S. deleyianum is a model organism for studying sulfur reduction and dissimilatory nitrate reduction as an energy source for growth. Also, it is a prominent model organism for studying the structural and functional characteristics of cytochrome c nitrite reductase. Here, we describe the features of this organism, together with the complete genome sequence and annotation. This is the first completed genome sequence of the genus Sulfurospirillum. The 2,306,351 bp long genome with its 2,291 protein-coding and 52 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

Indexed as

anaerobicCampylobacteraceaedissimilatory nitrate reductionGEBAGram-negativemicroaerobicmotilesulfur reduction

Identifiers

PMID21304697
PMCPMC3035281

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.