Evidence map›Paper›PMID 21304693›Full record

ArticleStandards in genomic sciences2010

Complete genome sequence of Ignisphaera aggregans type strain (AQ1.S1).

Markus Göker, Brittany Held, Alla Lapidus, Matt Nolan, Stefan Spring, Montri Yasawong, Susan Lucas, Tijana Glavina Del Rio, Hope Tice, Jan-Fang Cheng and 27 more

Abstract read
In one paragraph

Article in Standards in genomic sciences, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

37 authors.

Markus Göker
Brittany Held
Alla Lapidus
Matt Nolan
Stefan Spring
Montri Yasawong
Susan Lucas
Tijana Glavina Del Rio
Hope Tice
Jan-Fang Cheng
Lynne Goodwin
Roxanne Tapia
Sam Pitluck
Konstantinos Liolios
Natalia Ivanova
Konstantinos Mavromatis
Natalia Mikhailova
Amrita Pati
Amy Chen
Krishna Palaniappan
Evelyne Brambilla
Miriam Land
Loren Hauser
Yun-Juan Chang
Cynthia D Jeffries
Thomas Brettin
John C Detter
Cliff Han
Manfred Rohde
Johannes Sikorski
Tanja Woyke
James Bristow
Jonathan A Eisen
Victor Markowitz
Philip Hugenholtz
Nikos C Kyrpides
Hans-Peter Klenk

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ignisphaera aggregans Niederberger et al. 2006 is the type and sole species of genus Ignisphaera. This archaeal species is characterized by a coccoid-shape and is strictly anaerobic, moderately acidophilic, heterotrophic hyperthermophilic and fermentative. The type strain AQ1.S1(T) was isolated from a near neutral, boiling spring in Kuirau Park, Rotorua, New Zealand. This is the first completed genome sequence of the genus Ignisphaera and the fifth genome (fourth type strain) sequence in the family Desulfurococcaceae. The 1,875,953 bp long genome with its 2,009 protein-coding and 52 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

Indexed as

cocci-shapedCrenarchaeotaDesulfurococcaceaefermentativeGEBAhot springhyperthermophilemoderately acidophilicobligately anaerobic

Identifiers

PMID21304693
PMCPMC3035270

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.