Evidence map›Paper›PMID 21301100›Full record

ArticleActa crystallographica. Section F, Structural biology and crystallization communications2011

Preliminary joint neutron time-of-flight and X-ray crystallographic study of human ABO(H) blood group A glycosyltransferase.

B Schuman, S Z Fisher, A Kovalevsky, S N Borisova, M M Palcic, L Coates, P Langan, S V Evans

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Acta crystallographica. Section F, Structural biology and crystallization communications, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Crystals on the cover 2012.Acta crystallographica. Section F, Structural biology and crystallization communications · 2012
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

B SchumanDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, BC, Canada.
S Z Fisher
A Kovalevsky
S N Borisova
M M Palcic
L Coates
P Langan
S V Evans
Los Alamos National Laboratory · USUniversity of Victoria · CACarlsberg Laboratory · DKOak Ridge National Laboratory · US

Funding

Computational Tools for Neutron Protein CrystallographyR01GM071939 · NIGMS · UT-BATTELLE, LLC-OAK RIDGE NATIONAL LAB · PI COATES, LEIGHTON · 2004 to 2019
$4.3M
CIHR MOP-77655NIGMS NIH HHS R01 GM071939NIGMS NIH HHS R01GM071939
6 · The paper itself

Abstract

The biosyntheses of oligosaccharides and glycoconjugates are conducted by glycosyltransferases. These extraordinarily diverse and widespread enzymes catalyze the formation of glycosidic bonds through the transfer of a monosaccharide from a donor molecule to an acceptor molecule, with the stereochemistry about the anomeric carbon being either inverted or retained. Human ABO(H) blood group A α-1,3-N-acetylgalactosaminyltransferase (GTA) generates the corresponding antigen by the transfer of N-acetylgalactosamine from UDP-GalNAc to the blood group H antigen. To understand better how specific active-site-residue protons and hydrogen-bonding patterns affect substrate recognition and catalysis, neutron diffraction studies were initiated at the Protein Crystallography Station (PCS) at Los Alamos Neutron Science Center (LANSCE). A large single crystal was subjected to H/D exchange prior to data collection and time-of-flight neutron diffraction data were collected to 2.5 Å resolution at the PCS to ∼85% overall completeness, with complementary X-ray diffraction data collected from a crystal from the same drop and extending to 1.85 Å resolution. Here, the first successful neutron data collection from a glycosyltransferase is reported.

Indexed as

Neutron DiffractionNeutronsABO Blood-Group SystemCatalysisCrystallographyCrystallography, X-RayHumansHydrogen BondingN-AcetylgalactosaminyltransferasesProteinsProtonsABO Blood-Group SystemN-AcetylgalactosaminyltransferasesProteinsProtonsUDPgalactosamine-galactose acetylgalactosaminyltransferase

Identifiers

PMID21301100
PMCPMC3034622
OpenAlexW2076260889

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.