Evidence map›Paper›PMID 21300896›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2011

Blanks, a nuclear siRNA/dsRNA-binding complex component, is required for Drosophila spermiogenesis.

Vincent R Gerbasi, Jonathan B Preall, Daniel E Golden, David W Powell, Timothy D Cummins, Erik J Sontheimer

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 37 citations in OpenAlex.

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  10. Taming the giant within.PLoS genetics · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Vincent R GerbasiDepartment of Molecular Biosciences, Northwestern University, 2205 Tech Drive, Evanston, IL 60208, USA.
Jonathan B Preall
Daniel E Golden
David W Powell
Timothy D Cummins
Erik J Sontheimer
Northwestern University · USUniversity of Louisville · US

Funding

RNA Silencing Complex Assembly and FunctionR01GM072830 · NIGMS · NORTHWESTERN UNIVERSITY · PI SONTHEIMER, ERIK J. · 2005 to 2008
$942k
NIDDK NIH HHS DK176743NIGMS NIH HHS R01 GM072830NIGMS NIH HHS R01GM072830
6 · The paper itself

Abstract

Small RNAs and a diverse array of protein partners control gene expression in eukaryotes through a variety of mechanisms. By combining siRNA affinity chromatography and mass spectrometry, we have identified the double-stranded RNA-binding domain protein Blanks to be an siRNA- and dsRNA-binding protein from Drosophila S2 cells. We find that Blanks is a nuclear factor that contributes to the efficiency of RNAi. Biochemical fractionation of a Blanks-containing complex shows that the Blanks complex is unlike previously described RNA-induced silencing complexes and associates with the DEAD-box helicase RM62, a protein previously implicated in RNA silencing. In flies, Blanks is highly expressed in testes tissues and is necessary for postmeiotic spermiogenesis, but loss of Blanks is not accompanied by detectable transposon derepression. Instead, genes related to innate immunity pathways are up-regulated in blanks mutant testes. These results reveal Blanks to be a unique component of a nuclear siRNA/dsRNA-binding complex that contributes to essential RNA silencing-related pathways in the male germ line.

Indexed as

RNA, Small InterferingSpermatogenesisAnimalsDrosophilaGene Expression RegulationImmunity, InnateMaleRNA-Binding ProteinsRNA, Double-StrandedRNA InterferenceTestisRNA-Binding ProteinsRNA, Double-StrandedRNA, Small Interfering

Identifiers

PMID21300896
PMCPMC3044420
OpenAlexW2071141103

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.