Evidence map›Paper›PMID 21299233›Full record

ArticleBiochemistry2011

A peptidomics strategy to elucidate the proteolytic pathways that inactivate peptide hormones.

Arthur D Tinoco, Yun-Gon Kim, Debarati M Tagore, Jessica Wiwczar, William S Lane, Nika N Danial, Alan Saghatelian

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In one paragraph

Article in Biochemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.2field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Arthur D TinocoDepartment of Chemistry and Chemical Biology, Harvard University, 12 Oxford Street, Cambridge, Massachusetts 02138, United States.
Yun-Gon Kim
Debarati M Tagore
Jessica Wiwczar
William S Lane
Nika N Danial
Alan Saghatelian
Harvard University · USCenter for Systems Biology · USDana-Farber Cancer Institute · US

Funding

The Dual Role of Pro-apoptotic BAD in Insulin Secretion and Beta Cell SurvivalR01DK078081 · NIDDK · DANA-FARBER CANCER INST · PI Nika N Danial · 2008 to 2026
$5.7M
Discovery metabolite profiling of the prolyl peptidasesDP2OD002374 · OD · HARVARD UNIVERSITY · PI SAGHATELIAN, ALAN · 2007 to 2009
$2.6M
NIDDK NIH HHS 5 R01 DK078081NIDDK NIH HHS R01 DK078081NIH HHS 1DP2OD002374NIH HHS DP2 OD002374
6 · The paper itself

Abstract

Proteolysis plays a key role in regulating the levels and activity of peptide hormones. Characterization of the proteolytic pathways that cleave peptide hormones is of basic interest and can, in some cases, spur the development of novel therapeutics. The lack, however, of an efficient approach to identify endogenous fragments of peptide hormones has hindered the elucidation of these proteolytic pathways. Here, we apply a mass spectrometry (MS) based peptidomics approach to characterize the intestinal fragments of peptide histidine isoleucine (PHI), a hormone that promotes glucose-stimulated insulin secretion (GSIS). Our approach reveals a proteolytic pathway in the intestine that truncates PHI at its C-terminus to produce a PHI fragment that is inactive in a GSIS assay, a result that provides a potential mechanism of PHI regulation in vivo. Differences between these in vivo peptidomics studies and in vitro lysate experiments, which showed N- and C-terminal processing of PHI, underscore the effectiveness of this approach to discover physiologically relevant proteolytic pathways. Moreover, integrating this peptidomics approach with bioassays (i.e., GSIS) provides a general strategy to reveal proteolytic pathways that may regulate the activity of peptide hormones.

Indexed as

Amino Acid SequenceAnimalsBinding, CompetitiveDipeptidyl Peptidase 4Intestinal MucosaMiceMice, Inbred C57BLMolecular Sequence DataPeptide FragmentsPeptide HormonesPeptide HydrolasesPeptide PHIProteomicsTissue ExtractsDipeptidyl Peptidase 4Dpp4 protein, mousePeptide FragmentsPeptide HormonesPeptide HydrolasesPeptide PHITissue Extracts

Identifiers

PMID21299233
PMCPMC3076939
OpenAlexW2322924704

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.