Evidence map›Paper›PMID 21298289›Full record

ArticleHuman genetics2011

Polymorphic variants in tenascin-C (TNC) are associated with atherosclerosis and coronary artery disease.

Mollie A Minear, David R Crosslin, Beth S Sutton, Jessica J Connelly, Sarah C Nelson, Shera Gadson-Watson, Tianyuan Wang, David Seo, Jeffrey M Vance, Michael H Sketch and 6 more

Abstract read
In one paragraph

Article in Human genetics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.4field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 28 citations in OpenAlex.

  1. Trial
  2. Review
  3. Association ofGenetic testing and molecular biomarkers · 2024
    Article
  4. The role of TNC in atherosclerosis and drug development opportunities.International journal of biological sciences · 2024
    Review
  5. Matricellular proteins in atherosclerosis development.Matrix biology : journal of the International Society for Matrix Biology · 2023
    Review
  6. Article
  7. Article
  8. Association between Serum Kalirin Levels and theThe journal of Tehran Heart Center · 2018
    Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. A Guide for a Cardiovascular Genomics Biorepository: the CATHGEN Experience.Journal of cardiovascular translational research · 2015
    Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Advances in tenascin-C biology.Cellular and molecular life sciences : CMLS · 2011
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 8 institutions in 1 country.

Mollie A MinearCenter for Human Genetics, Duke University Medical Center, Durham, NC 27710, USA.
David R Crosslin
Beth S Sutton
Jessica J Connelly
Sarah C Nelson
Shera Gadson-Watson
Tianyuan Wang
David Seo
Jeffrey M Vance
Michael H Sketch
Carol Haynes
Pascal J Goldschmidt-Clermont
Svati H Shah
William E Kraus
Elizabeth R Hauser
Simon G Gregory
Duke Medical Center · USUniversity of Miami · USUniversity of Washington · USCampbell University · USCenter for Human Genetics · USDuke University · USDuke University Hospital · USUniversity of Virginia · US

Funding

SNP discoveryP01HL073042 · NHLBI · DUKE UNIVERSITY · PI NEVINS, JOSEPH R · 2002 to 2006
$13.5M
GENECARD-Gene Identification in Early-Onset CADR01HL073389 · NHLBI · DUKE UNIVERSITY · PI HAUSER, ELIZABETH R · 2003 to 2007
$3.5M
NHLBI NIH HHS HL073389NHLBI NIH HHS HL73042NHLBI NIH HHS P01 HL073042NHLBI NIH HHS R01 HL073389
6 · The paper itself

Abstract

Tenascin-C (TNC) is an extracellular matrix protein implicated in biological processes important for atherosclerotic plaque development and progression, including smooth muscle cell migration and proliferation. Previously, we observed differential expression of TNC in atherosclerotic aortas compared with healthy aortas. The goal of this study was to investigate whether common genetic variation within TNC is associated with risk of atherosclerosis and coronary artery disease (CAD) in three independent datasets. We genotyped 35 single nucleotide polymorphisms (SNPs), including 21 haplotype tagging SNPs, in two of these datasets: human aorta tissue samples (n = 205) and the CATHGEN cardiovascular study (n = 1,325). Eleven of these 35 SNPs were then genotyped in a third dataset, the GENECARD family study of early-onset CAD (n = 879 families). Three SNPs representing a block of linkage disequilibrium, rs3789875, rs12347433, and rs4552883, were significantly associated with atherosclerosis in multiple datasets and demonstrated consistent, but suggestive, genetic effects in all analyses. In combined analysis rs3789875 and rs12347433 were statistically significant after Bonferroni correction for 35 comparisons, p = 2 × 10(-6) and 5 × 10(-6), respectively. The SNP rs12347433 is a synonymous coding SNP and may be biologically relevant to the mechanism by which tenascin-C influences the pathophysiology of CAD and atherosclerosis. This is the first report of genetic association between polymorphisms in TNC and atherosclerosis or CAD.

Indexed as

Polymorphism, Single NucleotideAdultAtherosclerosisCoronary Artery DiseaseFemaleGenotypeHaplotypesHumansLinkage DisequilibriumMaleMiddle AgedPhenotypeTenascinTenascin

Identifiers

PMID21298289
PMCPMC3576662
OpenAlexW1964353612

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.