Evidence map›Paper›PMID 21297661›Full record

ArticleOncogene2011

MiniSOX9, a dominant-negative variant in colon cancer cells.

R Abdel-Samad, H Zalzali, C Rammah, J Giraud, C Naudin, S Dupasquier, F Poulat, B Boizet-Bonhoure, S Lumbroso, K Mouzat and 6 more

Open access · bronzeAbstract read
PubMed Publisher
In one paragraph

Article in Oncogene, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 40 citations in OpenAlex.

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  18. Algorithmic methods to infer the evolutionary trajectories in cancer progression.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  19. SOX9 directly regulates IGFBP-4 in the intestinal epithelium.American journal of physiology. Gastrointestinal and liver physiology · 2013
    Article
  20. Distinct levels of Sox9 expression mark colon epithelial stem cells that form colonoids in culture.American journal of physiology. Gastrointestinal and liver physiology · 2012
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 1 country.

R Abdel-SamadInstitut de Génomique Fonctionnelle, Montpellier, France.
H Zalzali
C Rammah
J Giraud
C Naudin
S Dupasquier
F Poulat
B Boizet-Bonhoure
S Lumbroso
K Mouzat
C Bonnans
C Pignodel
P Raynaud
P Fort
C Quittau-Prévostel
P Blache
Université de Montpellier · FRCentre National de la Recherche Scientifique · FRCentre Hospitalier Universitaire de Nîmes · FRInstitut de Génomique Fonctionnelle · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Inherited and acquired changes in pre-mRNA processing have significant roles in human diseases, especially cancer. Characterization of aberrantly spliced mRNAs may thus contribute to understand malignant transformation. We recently reported an anti-oncogenic potential for the SOX9 transcription factor in the colon. For instance, the Sox9 gene knock out in the mouse intestine results in an excess of proliferation with appearance of hyperplasia. SOX9 is expressed in colon cancer cells but its endogenous activity is weak. We looked for SOX9 variants that may impair SOX9 activity in colon cancer cells and we discovered MiniSOX9, a truncated version of SOX9 devoid of transactivation domain as a result of retention of the second intron. A significant overexpression of MiniSOX9 mRNA in human tumor samples compared with their matched normal tissues was observed by real-time reverse transcriptase-PCR. Immunohistochemistry revealed that MiniSOX9 is expressed at high levels in human colon cancer samples whereas it is undetectable in the surrounding healthy tissues. Finally, we discovered that MiniSOX9 behaves as a SOX9 inhibitor, inhibits protein kinase Cα promoter activity and stimulates the canonical Wnt pathway. This potential oncogenic activity of the SOX9 locus gives new insights on its role in colon cancer.

Indexed as

AdenocarcinomaAlternative SplicingAnimalsBase SequenceCell Line, TumorColonic NeoplasmsGenes, DominantHumansIntronsMiceMice, Mutant StrainsMolecular Sequence DataMutationPromoter Regions, GeneticProtein Kinase C-alphaSOX9 Transcription FactorProtein Kinase C-alphaSOX9 protein, humanSox9 protein, mouseSOX9 Transcription FactorWnt Proteins

Identifiers

PMID21297661
OpenAlexW2062197109

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.