Evidence map›Paper›PMID 21297620›Full record

ArticleNature methods2011

Visualizing a one-way protein encounter complex by ultrafast single-molecule mixing.

Yann Gambin, Virginia VanDelinder, Allan Chris M Ferreon, Edward A Lemke, Alex Groisman, Ashok A Deniz

Abstract read
In one paragraph

Article in Nature methods, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Integrated In-Plane Nanofluidic Devices for Resistive-Pulse Sensing.Annual review of analytical chemistry (Palo Alto, Calif.) · 2024
    Review
  7. Folding-upon-binding pathways of an intrinsically disordered protein from a deep Markov state model.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Single-Molecule Two-Color Coincidence Detection of Unlabeled alpha-Synuclein Aggregates.Angewandte Chemie (Weinheim an der Bergstrasse, Germany) · 2023
    Article
  13. Choosing the Probe for Single-Molecule Fluorescence Microscopy.International journal of molecular sciences · 2022
    Review
  14. Article
  15. Article
  16. Review
  17. Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Yann GambinDepartment of Molecular Biology, The Scripps Research Institute, La Jolla, California, USA. y.gambin@imb.uq.edu
Virginia VanDelinder
Allan Chris M Ferreon
Edward A Lemke
Alex Groisman
Ashok A Deniz

Funding

Single Molecule Studies of Protein Folding MechanismsR01GM066833 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI DENIZ, ASHOK A · 2003 to 2017
$5.2M
Single-molecule structural studies of unstable amyloidogenic protein oligomersR21AG033382 · NIA · SCRIPPS RESEARCH INSTITUTE, THE · PI DENIZ, ASHOK A · 2009 to 2010
$402k
Single-Molecule Study of Synuclein Folding/FibrillationF32NS054468 · NINDS · SCRIPPS RESEARCH INSTITUTE, THE · PI FERREON, ALLAN CHRIS · 2006 to 2008
$151k
NIA NIH HHS R21 AG033382NIGMS NIH HHS R01 GM066833NINDS NIH HHS F32 NS054468
6 · The paper itself

Abstract

We combined rapid microfluidic mixing with single-molecule fluorescence resonance energy transfer to study the folding kinetics of the intrinsically disordered human protein α-synuclein. The time-resolution of 0.2 ms revealed initial collapse of the unfolded protein induced by binding with lipid mimics and subsequent rapid formation of transient structures in the encounter complex. The method also enabled analysis of rapid dissociation and unfolding of weakly bound complexes triggered by massive dilution.

Indexed as

alpha-SynucleinFluorescence Resonance Energy TransferHumansKineticsMicrofluidic Analytical TechniquesProtein BindingProtein Foldingalpha-Synuclein

Identifiers

PMID21297620
PMCPMC3071799

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.