Evidence map›Paper›PMID 21296746›Full record

ArticleHuman genomics2011

RGD: a comparative genomics platform.

Mary Shimoyama, Jennifer R Smith, Tom Hayman, Stan Laulederkind, Tim Lowry, Rajni Nigam, Victoria Petri, Shur-Jen Wang, Melinda Dwinell, Howard Jacob and 1 more

Abstract readComparative Study
In one paragraph

Article in Human genomics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. The Rat Genome Database 2013--data, tools and users.Briefings in bioinformatics · 2013
    Article
  8. Article
  9. GoSynthetic database tool to analyse natural and engineered molecular processes.Database : the journal of biological databases and curation · 2013
    Article
  10. Article
  11. Article
  12. Analysis of disease-associated objects at the Rat Genome Database.Database : the journal of biological databases and curation · 2013
    Article
  13. Article
  14. Article
  15. MEDIC: a practical disease vocabulary used at the Comparative Toxicogenomics Database.Database : the journal of biological databases and curation · 2012
    Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Mary ShimoyamaRat Genome Database, Human and Molecular Genetics Center, Medical College of Wisconsin, 8701 Watertown Plank Road, Milwaukee, WI 53226, USA. shimoyama@mcw.edu
Jennifer R Smith
Tom Hayman
Stan Laulederkind
Tim Lowry
Rajni Nigam
Victoria Petri
Shur-Jen Wang
Melinda Dwinell
Howard Jacob
RGD Team

Funding

RAT GENOME DATABASER01HL064541 · NHLBI · MEDICAL COLLEGE OF WISCONSIN · PI ANNE E. KWITEK · 1999 to 2026
$50.0M
NHLBI NIH HHS R01 HL064541
6 · The paper itself

Abstract

The Rat Genome Database (RGD) (http://rgd.mcw.edu) provides a comprehensive platform for comparative genomics and genetics research. RGD houses gene, QTL and polymorphic marker data for rat, mouse and human and provides easy access to data through sophisticated searches, disease portals, interactive pathway diagrams and rat and human genome browsers.

Indexed as

Databases, GeneticAnimalsCardiovascular DiseasesGenomeHumansMetabolic DiseasesMiceModels, GeneticNeoplasmsNervous System DiseasesObesityOnline SystemsPhenotypeQuantitative Trait LociRats

Identifiers

PMID21296746
PMCPMC3222152

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.