Evidence map›Paper›PMID 21293860›Full record

ArticlePlant cell reports2011

Tissue culture-induced flower-color changes in Saintpaulia caused by excision of the transposon inserted in the flavonoid 3', 5' hydroxylase (F3'5'H) promoter.

Mitsuru Sato, Takashi Kawabe, Munetaka Hosokawa, Fumi Tatsuzawa, Motoaki Doi

Abstract read
PubMed Publisher
In one paragraph

Article in Plant cell reports, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 64 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Micropropagation protocol forJournal, genetic engineering & biotechnology · 2018
    Article
  11. Article
  12. Article
  13. Somatizing the transposons action.Mobile genetic elements · 2017
    Review
  14. Review
  15. Reverse transcriptase domain sequences from tree peony (Biotechnology, biotechnological equipment · 2014
    Article
  16. Flower colour and cytochromes P450.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2013
    Review
  17. Review
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Mitsuru SatoGraduate School of Agriculture, Kyoto University, Sakyo-ku, Kyoto, 606-8502, Japan.
Takashi Kawabe
Munetaka Hosokawa
Fumi Tatsuzawa
Motoaki Doi
Kyoto University · JPKyoto University of Education · JPIwate University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The variegated Saintpaulia cultivar Thamires (Saintpaulia sp.), which has pink petals with blue splotches, is generally maintained by leaf cuttings. In contrast, tissue culture-derived progeny of the cultivar showed not only a high percentage of mutants with solid-blue petals but also other solid-color variants, which have not been observed from leaf cuttings. Solid-color phenotypes were inherited stably by their progeny from tissue culture. Petals from each solid-color variant were analyzed by high-performance liquid chromatography and shown to contain different proportions of three main anthocyanin derivatives: malvidin, peonidin, and pelargonidin. Analysis of flavonoid 3', 5'-hydroxylase (F3'5'H) sequences showed no differences in the coding region among the variants and variegated individuals. However, a transposon belonging to the hAT superfamily was found in the promoter region of variegated individuals, and the presence of transposon-related insertions or deletions correlated with the observed flower-color phenotypes. Solid-blue flower mutants contained 8-base pair (bp) insertions (transposon excision footprints), while solid-pink mutants had 58- to 70-bp insertions, and purple- and deep-purple mutants had 21- and 24-bp deletions, respectively. Real-time reverse transcription polymerase chain reaction (RT-PCR) analysis showed that F3'5'H expression levels correlated with insertions and deletions (indels) caused by hAT excision, resulting in flower-color differences. Our results showed that tissue culture of Saintpaulia 'Thamires' elicits transposon excision, which in turn alters F3'5'H expression levels and flower colors.

Indexed as

AnthocyaninsBase SequenceChromatography, High Pressure LiquidCloning, MolecularCytochrome P-450 Enzyme SystemDNA, ComplementaryDNA Transposable ElementsFlowersGene Expression Regulation, PlantINDEL MutationMagnoliopsidaMolecular Sequence DataPhenotypePhylogenyPigments, BiologicalPlant ProteinsAnthocyaninsCytochrome P-450 Enzyme SystemDNA, ComplementaryDNA Transposable Elementsflavonoid 3',5'-hydroxylasePigments, BiologicalPlant Proteins

Identifiers

PMID21293860
OpenAlexW2002260670

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.