Evidence map›Paper›PMID 21289062›Full record

ArticleGenes & development2011

Yeast cells can access distinct quiescent states.

Maja M Klosinska, Christopher A Crutchfield, Patrick H Bradley, Joshua D Rabinowitz, James R Broach

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 109 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
109citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

109 citing papers in PubMed, 1 synthesis or guideline pooled it, 173 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Quiescence improvesbioRxiv : the preprint server for biology · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. Quiescence Multiverse.Biomolecules · 2025
    Review
  8. Vacuolar Proteases ofJournal of fungi (Basel, Switzerland) · 2025
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Acidic media promotes quiescence entry inbioRxiv : the preprint server for biology · 2023
    Article
  17. Article
  18. Quiescence inAnnual review of genetics · 2022
    Review
  19. The TOR complex controls ATP levels to regulate actin cytoskeleton dynamics inProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  20. The molecular architecture of cell cycle arrest.Molecular systems biology · 2022
    Article

49 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Maja M KlosinskaDepartment of Molecular Biology, Princeton University, Princeton, New Jersey 08544, USA.
Christopher A Crutchfield
Patrick H Bradley
Joshua D Rabinowitz
James R Broach
Princeton University · US

Funding

Spatial Patterning During DevelopmentP50GM071508 · NIGMS · PRINCETON UNIVERSITY · PI POWELL, SUSAN M · 2004 to 2013
$30.6M
Ras and TOR Signaling in YeastR01GM076562 · NIGMS · PRINCETON UNIVERSITY · PI BROACH, JAMES R. · 2007 to 2019
$5.0M
NIGMS NIH HHS GM076562NIGMS NIH HHS P50 GM071508NIGMS NIH HHS R01 GM076562
6 · The paper itself

Abstract

We conducted a phenotypic, transcriptional, metabolic, and genetic analysis of quiescence in yeast induced by starvation of prototrophic cells for one of three essential nutrients (glucose, nitrogen, or phosphate) and compared those results with those obtained with cells growing slowly due to nutrient limitation. These studies address two related questions: (1) Is quiescence a state distinct from any attained during mitotic growth, and (2) does the nature of quiescence differ depending on the means by which it is induced? We found that either limitation or starvation for any of the three nutrients elicits all of the physiological properties associated with quiescence, such as enhanced cell wall integrity and resistance to heat shock and oxidative stress. Moreover, the starvations result in a common transcriptional program, which is in large part a direct extrapolation of the changes that occur during slow growth. In contrast, the metabolic changes that occur upon starvation and the genetic requirements for surviving starvation differ significantly depending on the nutrient for which the cell is starved. The genes needed by cells to survive starvation do not overlap the genes that are induced upon starvation. We conclude that cells do not access a unique and discrete G(0) state, but rather are programmed, when nutrients are scarce, to prepare for a range of possible future stressors. Moreover, these survival strategies are not unique to quiescence, but are engaged by the cell in proportion to nutrient scarcity.

Indexed as

Cell CycleCell ProliferationCell SurvivalCluster AnalysisGene Expression ProfilingGene Expression Regulation, DevelopmentalGene Expression Regulation, FungalGenes, DevelopmentalGlucoseMetabolic Networks and PathwaysModels, BiologicalNitrogenOrganisms, Genetically ModifiedPhosphatesSaccharomyces cerevisiaeStarvationGlucoseNitrogenPhosphates

Identifiers

PMID21289062
PMCPMC3042157
OpenAlexW2143753421

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.