Evidence map›Paper›PMID 21285961›Full record

ArticleMolecular therapy : the journal of the American Society of Gene Therapy2011

Lentiviral vector design and imaging approaches to visualize the early stages of cellular reprogramming.

Eva Warlich, Johannes Kuehle, Tobias Cantz, Martijn H Brugman, Tobias Maetzig, Melanie Galla, Adam A Filipczyk, Stephan Halle, Hannes Klump, Hans R Schöler and 3 more

Abstract read
In one paragraph

Article in Molecular therapy : the journal of the American Society of Gene Therapy, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 159 papers.

0numbers the graph read from it
0cells of the map it votes in
159citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

159 citing papers in PubMed.

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  20. Interactions of the Immune System with Human Kidney Organoids.Transplant international : official journal of the European Society for Organ Transplantation · 2024
    Article

99 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Eva WarlichDepartment of Experimental Hematology, Hannover Medical School, Hannover, Germany.
Johannes Kuehle
Tobias Cantz
Martijn H Brugman
Tobias Maetzig
Melanie Galla
Adam A Filipczyk
Stephan Halle
Hannes Klump
Hans R Schöler
Christopher Baum
Timm Schroeder
Axel Schambach

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Induced pluripotent stem cells (iPSCs) can be derived from somatic cells by gene transfer of reprogramming transcription factors. Expression levels of these factors strongly influence the overall efficacy to form iPSC colonies, but additional contribution of stochastic cell-intrinsic factors has been proposed. Here, we present engineered color-coded lentiviral vectors in which codon-optimized reprogramming factors are co-expressed by a strong retroviral promoter that is rapidly silenced in iPSC, and imaged the conversion of fibroblasts to iPSC. We combined fluorescence microscopy with long-term single cell tracking, and used live-cell imaging to analyze the emergence and composition of early iPSC clusters. Applying our engineered lentiviral vectors, we demonstrate that vector silencing typically occurs prior to or simultaneously with the induction of an Oct4-EGFP pluripotency marker. Around 7 days post-transduction (pt), a subfraction of cells in clonal colonies expressed Oct4-EGFP and rapidly expanded. Cell tracking of single cell-derived iPSC colonies supported the concept that stochastic epigenetic changes are necessary for reprogramming. We also found that iPSC colonies may emerge as a genetic mosaic originating from different clusters. Improved vector design with continuous cell tracking thus creates a powerful system to explore the subtle dynamics of biological processes such as early reprogramming events.

Indexed as

AnimalsCells, CulturedCellular ReprogrammingGenetic VectorsGreen Fluorescent ProteinsInduced Pluripotent Stem CellsLentivirusMiceMice, Inbred NODMice, SCIDOctamer Transcription Factor-3Teratomaenhanced green fluorescent proteinGreen Fluorescent ProteinsOctamer Transcription Factor-3

Identifiers

PMID21285961
PMCPMC3070104

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.