Evidence map›Paper›PMID 21285328›Full record

ArticleThe Plant cell2011

The R2R3 MYB transcription factor DUO1 activates a male germline-specific regulon essential for sperm cell differentiation in Arabidopsis.

Michael Borg, Lynette Brownfield, Hoda Khatab, Anna Sidorova, Melanie Lingaya, David Twell

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 98 papers.

0numbers the graph read from it
0cells of the map it votes in
98citing papers in PubMed
12.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

98 citing papers in PubMed, 183 citations in OpenAlex.

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  18. Genome-Wide Identification and Analysis ofPlants (Basel, Switzerland) · 2023
    Article
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  20. Article

38 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 3 countries.

Michael BorgDepartment of Biology, University of Leicester, Leicester LE17RH, United Kingdom.
Lynette Brownfield
Hoda Khatab
Anna Sidorova
Melanie Lingaya
David Twell
University of Leicester · GBÉcole Polytechnique Fédérale de Lausanne · CH

Funding

Biotechnology and Biological Sciences Research Council BB/C004205/1
6 · The paper itself

Abstract

The male germline in flowering plants arises through asymmetric division of a haploid microspore. The resulting germ cell undergoes mitotic division and specialization to produce the two sperm cells required for double fertilization. The male germline-specific R2R3 MYB transcription factor DUO1 POLLEN1 (DUO1) plays an essential role in sperm cell specification by activating a germline-specific differentiation program. Here, we show that ectopic expression of DUO1 upregulates a significant number (~63) of germline-specific or enriched genes, including those required for fertilization. We validated 14 previously unknown DUO1 target genes by demonstrating DUO1-dependent promoter activity in the male germline. DUO1 is shown to directly regulate its target promoters through binding to canonical MYB sites, suggesting that the DUO1 target genes validated thus far are likely to be direct targets. This work advances knowledge of the DUO1 regulon that encompasses genes with a range of cellular functions, including transcription, protein fate, signaling, and transport. Thus, the DUO1 regulon has a major role in shaping the germline transcriptome and functions to commit progenitor germ cells to sperm cell differentiation.

Indexed as

ReproductionArabidopsisArabidopsis ProteinsComputational BiologyGene Expression ProfilingGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantGenetic Complementation TestNicotianaOligonucleotide Array Sequence AnalysisPlants, Genetically ModifiedPollenPromoter Regions, GeneticRegulonTranscription FactorsArabidopsis ProteinsDUO1 protein, ArabidopsisTranscription Factors

Identifiers

PMID21285328
PMCPMC3077786
OpenAlexW2165100850

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.