Evidence map›Paper›PMID 21278214›Full record

Trial reportThe Journal of infectious diseases2011

Host genetic determinants of T cell responses to the MRKAd5 HIV-1 gag/pol/nef vaccine in the step trial.

Jacques Fellay, Nicole Frahm, Kevin V Shianna, Elizabeth T Cirulli, Danilo R Casimiro, Michael N Robertson, Barton F Haynes, Daniel E Geraghty, M Juliana McElrath, David B Goldstein and 2 more

Open access · bronzeAbstract readMulticenter StudyRandomized Controlled Trial
In one paragraph

Trial report in The Journal of infectious diseases, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 44 citations in OpenAlex.

  1. Trial
  2. Trial
  3. Trial
  4. Trial
  5. Article
  6. Human genetics of responses to vaccines.Clinical and experimental immunology · 2025
    Review
  7. Specificity of CD8Vaccines · 2020
    Article
  8. Review
  9. Article
  10. Article
  11. Changing face of vaccination in immunocompromised hosts.Current infectious disease reports · 2014
    Article
  12. Article
  13. Review
  14. Article
  15. Genomic architecture of HIV-1 infection: current status & challenges.The Indian journal of medical research · 2013
    Review
  16. Article
  17. Article
  18. Article
  19. Host genes important to HIV replication and evolution.Cold Spring Harbor perspectives in medicine · 2012
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 1 country.

Jacques FellayCenter for Human Genome Variation, Duke University School of Medicine, Durham, NC 27708, USA. jcf20@duke.edu
Nicole Frahm
Kevin V Shianna
Elizabeth T Cirulli
Danilo R Casimiro
Michael N Robertson
Barton F Haynes
Daniel E Geraghty
M Juliana McElrath
David B Goldstein
National Institute of Allergy and Infectious Diseases Center for HIV/AIDS Vaccine Immunology
NIAID HIV Vaccine Trials Network
Center for Human Genetics · USFred Hutch Cancer Center · USUnited States Military Academy · USCancer Research Center · USClinical Research Institute · US

Funding

Viral Sequencing CoreU19AI067854 · NIAID · DUKE UNIVERSITY · PI LETVIN, NORMAN L · 2006 to 2011
$290.5M
HVTN Laboratory ProgramU01AI068618 · NIAID · FRED HUTCHINSON CANCER RESEARCH CENTER · PI MCELRATH, MARGARET JULIANA · 2006 to 2010
$82.6M
Genetics Training Grant-Year 26T32GM007754 · NIGMS · DUKE UNIVERSITY · PI HAASE, STEVEN B · 1985 to 2019
$8.3M
NIAID NIH HHS U01 AI068618NIAID NIH HHS U19 AI067854NIGMS NIH HHS T32 GM007754
6 · The paper itself

Abstract

Understanding how human genetic variation impacts individual response to immunogens is fundamental for rational vaccine development. To explore host mechanisms involved in cellular immune responses to the MRKAd5 human immunodeficiency virus type 1 (HIV-1) gag/pol/nef vaccine tested in the Step trial, we performed a genome-wide association study of determinants of HIV-specific T cell responses, measured by interferon γ enzyme-linked immunospot assays. No human genetic variant reached genome-wide significance, but polymorphisms located in the major histocompatibility complex (MHC) region showed the strongest association with response to the HIV-1 Gag protein: HLA-B alleles known to be associated with differences in HIV-1 control were responsible for these associations. The implication of the same HLA alleles in vaccine-induced cellular immunity and in natural immune control is of relevance for vaccine design. Furthermore, our results demonstrate the importance of considering the host immunogenetic background in the analysis of immune responses to T cell vaccines.

Indexed as

AdultAIDS VaccinesCD8-Positive T-LymphocytesEnzyme-Linked Immunosorbent AssayGene Products, gagGenes, gagGenes, nefGenes, polGenotypeHIV-1HIV InfectionsHumansMaleMiddle AgedPolymorphism, GeneticRegression AnalysisAIDS VaccinesGene Products, gag

Identifiers

PMID21278214
PMCPMC3071133
OpenAlexW2124137007

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.