Evidence map›Paper›PMID 21278163›Full record

ArticleNucleic acids research2011

TEFM (c17orf42) is necessary for transcription of human mtDNA.

Michal Minczuk, Jiuya He, Anna M Duch, Thijs J Ettema, Aleksander Chlebowski, Karol Dzionek, Leo G J Nijtmans, Martijn A Huynen, Ian J Holt

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 115 papers.

0numbers the graph read from it
0cells of the map it votes in
115citing papers in PubMed
4.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

115 citing papers in PubMed, 181 citations in OpenAlex.

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  15. The initiation of mitochondrial DNA replication.Biochemical Society transactions · 2024
    Review
  16. Review
  17. Article
  18. Mitochondrial protein synthesis quality control.Human molecular genetics · 2024
    Review
  19. Review
  20. Mitochondria transcription and cancer.Cell death discovery · 2024
    Review

55 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Michal MinczukMRC Mitochondrial Biology Unit, Wellcome Trust/MRC Building, Hills Road, Cambridge CB2 0XY, UK. michal.minczuk@mrc-mbu.cam.ac.uk
Jiuya He
Anna M Duch
Thijs J Ettema
Aleksander Chlebowski
Karol Dzionek
Leo G J Nijtmans
Martijn A Huynen
Ian J Holt
MRC Mitochondrial Biology Unit · GBRadboud University Medical Center · NLRadboud University Nijmegen · NL

Funding

Biotechnology and Biological Sciences Research Council BB/F012802/1Medical Research Council MC_U105663140Medical Research Council MC_U105697135
6 · The paper itself

Abstract

Here we show that c17orf42, hereafter TEFM (transcription elongation factor of mitochondria), makes a critical contribution to mitochondrial transcription. Inactivation of TEFM in cells by RNA interference results in respiratory incompetence owing to decreased levels of H- and L-strand promoter-distal mitochondrial transcripts. Affinity purification of TEFM from human mitochondria yielded a complex comprising mitochondrial transcripts, mitochondrial RNA polymerase (POLRMT), pentatricopeptide repeat domain 3 protein (PTCD3), and a putative DEAD-box RNA helicase, DHX30. After RNase treatment only POLRMT remained associated with TEFM, and in human cultured cells TEFM formed foci coincident with newly synthesized mitochondrial RNA. Based on deletion mutants, TEFM interacts with the catalytic region of POLRMT, and in vitro TEFM enhanced POLRMT processivity on ss- and dsDNA templates. TEFM contains two HhH motifs and a Ribonuclease H fold, similar to the nuclear transcription elongation regulator Spt6. These findings lead us to propose that TEFM is a mitochondrial transcription elongation factor.

Indexed as

Catalytic DomainCell LineDNA-Directed RNA PolymerasesDNA, MitochondrialGene SilencingHumansMitochondriaMitochondrial ProteinsOxidative PhosphorylationProtein Structure, TertiaryRNARNA, MitochondrialTranscriptional Elongation FactorsTranscription FactorsDNA-Directed RNA PolymerasesDNA, MitochondrialMitochondrial ProteinsPOLRMT protein, humanRNARNA, MitochondrialTEFM protein, humanTranscriptional Elongation FactorsTranscription Factors

Identifiers

PMID21278163
PMCPMC3105396
OpenAlexW2068565752

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.