Evidence map›Paper›PMID 21277817›Full record

ArticleMolecular genetics and metabolism2011

Genetic variation in the matrix metalloproteinase genes and diabetic nephropathy in type 1 diabetes.

Masahiko Kure, Marcus G Pezzolesi, G David Poznik, Pisut Katavetin, Jan Skupien, Jonathon S Dunn, Josyf C Mychaleckyj, James H Warram, Andrzej S Krolewski

Open access · greenAbstract read
In one paragraph

Article in Molecular genetics and metabolism, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.6field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

  1. Matrix metalloproteinases in kidney homeostasis and diseases: an update.American journal of physiology. Renal physiology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Masahiko KureResearch Division, Joslin Diabetes Center, and Department of Medicine, Harvard Medical School, Boston, MA, USA.
Marcus G Pezzolesi
G David Poznik
Pisut Katavetin
Jan Skupien
Jonathon S Dunn
Josyf C Mychaleckyj
James H Warram
Andrzej S Krolewski
Joslin Diabetes Center · USHarvard University · USUniversity of Virginia · US

Funding

SPECIAL ASSAY COREP30DK036836 · NIDDK · JOSLIN DIABETES CENTER · PI JEAN E. SCHAFFER · 1986 to 2026
$50.5M
TRAINING IN DIABETES AND METABOLISMT32DK007260 · NIDDK · JOSLIN DIABETES CENTER · PI LAURIE J GOODYEAR · 1986 to 2026
$13.6M
Mapping genes for proteinuria in type II diabetesR01DK058549 · NIDDK · JOSLIN DIABETES CENTER · PI KROLEWSKI, ANDRZEJ S · 2001 to 2010
$4.4M
Mapping Genes for End-Stage Renal Disease in Type 1 DiabetesR01DK077532 · NIDDK · JOSLIN DIABETES CENTER · PI KROLEWSKI, ANDRZEJ S · 2006 to 2008
$1.7M
NIDDK NIH HHS DK36836NIDDK NIH HHS DK58549NIDDK NIH HHS DK77532NIDDK NIH HHS P30 DK036836NIDDK NIH HHS R01 DK058549NIDDK NIH HHS R01 DK077532NIDDK NIH HHS T32 DK007260NIDDK NIH HHS T32 DK007260-31PHS HHS PL 105-33PHS HHS PL 106-554PHS HHS PL 107-360
6 · The paper itself

Abstract

Genetic data support the notion that polymorphisms in members of the matrix metalloproteinase (MMP) family of genes play an important role in extracellular matrix remodeling and contribute to the pathogenesis of vascular disease. To identify novel genetic markers for diabetic nephropathy (DN), we examined the relationship between MMP gene polymorphisms and DN in the Genetics of Kidneys in Diabetes (GoKinD) population. Genotypic data from the Genetic Association Information Network (GAIN) type 1 DN project were analyzed for associations across 21 MMP genes in 1705 individual with type 1 diabetes, including 885 normoalbuminuric control subjects and 820 advanced DN case subjects. In total, we investigated the role of 1283 SNPs (198 genotyped SNPs and 1085 imputed SNPs) mapping to the MMP genes. We identified associations at several correlated SNPs across a 29.2kb interval on chromosome 11q at the MMP-3/MMP-12 locus. The strongest associations occurred at 2 highly-correlated SNPs, rs610950 (OR=0.50, P=1.6×10(-5)) and rs1277718 (OR=0.50, P=2.1×10(-5)). Further examination of this locus identified 17 SNPs (2 genotyped SNPs and 15 imputed SNPs) in complete linkage disequilibrium associated with DN (P-values<2.5×10(-4)), including a non-synonymous SNP (rs652438, Asn357Ser) located in exon 8 of MMP-12 that significantly reduced the risk of DN among carriers of the serine substitution relative to homozygous carriers of asparagine (OR=0.51; 95% CI=0.37-0.71, P=6.2×10(-5)). Taken together, our study suggests that genetic variations within the MMP-3/MMP-12 locus influence susceptibility of DN in type 1 diabetes.

Indexed as

Genetic VariationAdolescentAdultAllelesChildChild, PreschoolDiabetes Mellitus, Type 1Diabetic NephropathiesGenetic Predisposition to DiseaseGenome-Wide Association StudyGenotypeHumansInfantInfant, NewbornMatrix MetalloproteinasesYoung AdultMatrix Metalloproteinases

Identifiers

PMID21277817
PMCPMC3081941
OpenAlexW1991458610

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.