Evidence map›Paper›PMID 2127735›Full record

ArticleCurrent genetics1990

The DNA-binding protein RAP1 is required for efficient transcriptional activation of the yeast PYK glycolytic gene.

J B McNeil, P Dykshoorn, J N Huy, S Small

Abstract read
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In one paragraph

Article in Current genetics, 1990. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. Mediator complex association with constitutively transcribed genes in yeast.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
  4. Multiple domains of repressor activator protein 1 contribute to facilitated binding of glycolysis regulatory protein 1.Proceedings of the National Academy of Sciences of the United States of America · 1998
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Yeast glycolytic mRNAs are differentially regulated.Molecular and cellular biology · 1991
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

J B McNeilDepartment of Microbiology, University of Toronto, Ontario, Canada.
P Dykshoorn
J N Huy
S Small
University of Toronto · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We show by deletion mutagenesis, followed by in vivo and in vitro analysis, that the binding of a protein factor to the upstream activation sequence (UAS) of the Saccharomyces cerevisiae glycolytic gene PYK, encoding pyruvate kinase, is required for efficient transcription of the corresponding coding region. In addition, gel electrophoretic mobility shift and DNase I protection studies, involving yeast gene products expressed in E. coli, suggest that this trans-acting DNA-binding protein is encoding by the RAP1 gene. The identification of RAP1 binding sites located within the UAS element of the yeast PYK, PGK (phosphoglycerate kinase) and ENO1 (enolase) genes, and in the 5'-upstream region of the ADHI (alcohol dehydrogenase) gene, suggests that a mechanism of coordinate gene expression involving several of the glycolytic genes may exist in yeast.

Indexed as

Gene Expression Regulation, FungalTranscription, GeneticBase SequenceConsensus SequenceDNA-Binding ProteinsDNA, FungalGenes, FungalGTP-Binding ProteinsMolecular Sequence DataMutagenesisPyruvate Kinaserap GTP-Binding ProteinsRegulatory Sequences, Nucleic AcidSaccharomyces cerevisiaeDNA-Binding ProteinsDNA, FungalGTP-Binding ProteinsPyruvate Kinaserap GTP-Binding Proteins

Identifiers

PMID2127735
OpenAlexW2009600767

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.