Evidence map›Paper›PMID 21277209›Full record

ArticleCurrent biology : CB2011

Modeling vesicle traffic reveals unexpected consequences for Cdc42p-mediated polarity establishment.

Anita T Layton, Natasha S Savage, Audrey S Howell, Susheela Y Carroll, David G Drubin, Daniel J Lew

Abstract read
In one paragraph

Article in Current biology : CB, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 83 papers.

0numbers the graph read from it
0cells of the map it votes in
83citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

83 citing papers in PubMed.

  1. Article
  2. Article
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  4. Article
  5. Article
  6. Roles for the canonical polarity machinery in thebioRxiv : the preprint server for biology · 2025
    Article
  7. Article
  8. Article
  9. Patterning of the cell cortex by Rho GTPases.Nature reviews. Molecular cell biology · 2024
    Review
  10. Article
  11. Review
  12. Article
  13. Article
  14. Chemotactic movement of a polarity site enables yeast cells to find their mates.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Review
  20. Article

23 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Anita T LaytonDepartment of Mathematics, Duke University, Durham, NC 27708, USA.
Natasha S Savage
Audrey S Howell
Susheela Y Carroll
David G Drubin
Daniel J Lew

Funding

The budding yeast endocytic pathwayR01GM050399 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI DRUBIN, DAVID G · 1997 to 2015
$5.9M
POLARITY ESTABLISHMENT IN YEASTR01GM062300 · NIGMS · DUKE UNIVERSITY · PI LEW, DANIEL J · 2001 to 2016
$5.0M
NIGMS NIH HHS GM50399NIGMS NIH HHS GM62300NIGMS NIH HHS R01 GM050399NIGMS NIH HHS R01 GM062300
6 · The paper itself

Abstract

backgroundPolarization in yeast has been proposed to involve a positive feedback loop whereby the polarity regulator Cdc42p orients actin cables, which deliver vesicles carrying Cdc42p to the polarization site. Previous mathematical models treating Cdc42p traffic as a membrane-free flux suggested that directed traffic would polarize Cdc42p, but it remained unclear whether Cdc42p would become polarized without the membrane-free simplifying assumption.

resultsWe present mathematical models that explicitly consider stochastic vesicle traffic via exocytosis and endocytosis, providing several new insights. Our findings suggest that endocytic cargo influences the timing of vesicle internalization in yeast. Moreover, our models provide quantitative support for the view that integral membrane cargo proteins would become polarized by directed vesicle traffic given the experimentally determined rates of vesicle traffic and diffusion. However, such traffic cannot effectively polarize the more rapidly diffusing Cdc42p in the model without making additional assumptions that seem implausible and lack experimental support.

conclusionsOur findings suggest that actin-directed vesicle traffic would perturb, rather than reinforce, polarization in yeast.

Indexed as

Cell PolarityModels, BiologicalActin Cytoskeletoncdc42 GTP-Binding Protein, Saccharomyces cerevisiaeEndocytosisExocytosisFeedback, PhysiologicalProtein TransportSaccharomyces cerevisiaeSeptinsSNARE Proteinscdc42 GTP-Binding Protein, Saccharomyces cerevisiaeSeptinsSNARE Proteins

Identifiers

PMID21277209
PMCPMC3052744

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.