Evidence map›Paper›PMID 21274659›Full record

ArticleMolecular biotechnology2011

Improved FLP recombinase, FLPe, efficiently removes marker gene from transgene locus developed by Cre-lox mediated site-specific gene integration in rice.

M Aydin Akbudak, Vibha Srivastava

Abstract read
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Article in Molecular biotechnology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Review
  3. PeerJ · 2021
    Article
  4. Article
  5. Double UP: A Dual Color, Internally Controlled Platform forFrontiers in molecular neuroscience · 2020
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Gene stacking by recombinases.Plant biotechnology journal · 2016
    Review
  11. Article
  12. Microbial cell (Graz, Austria) · 2015
    Review
  13. Review
  14. Advanced genetic tools for plant biotechnology.Nature reviews. Genetics · 2013
    Review
  15. Article
  16. Review
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

M Aydin AkbudakDepartment of Crop, Soil and Environmental Sciences, University of Arkansas, Fayetteville, AR 72701, USA.
Vibha Srivastava
University of Arkansas at Fayetteville · USUniversity of Arkansas System · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Site-specific recombination systems, such as FLP-FRT and Cre-lox, carry out precise recombination reactions on their respective targets in plant cells. This has led to the development of two important applications in plant biotechnology: marker-gene deletion and site-specific gene integration. To draw benefits of both applications, it is necessary to implement them in a single transformation process. In order to develop this new process, the present study evaluated the efficiency of FLP-FRT system for excising marker gene from the transgene locus developed by Cre-lox mediated site-specific integration in rice. Two different FLP recombinases, the wild-type FLP (FLPwt) and its thermostable derivative, FLPe, were used for the excision of marker gene flanked by FLP recombination targets (FRT). While marker excision mediated by FLPwt was undetectable, use of FLPe resulted in efficient marker excision in a number of transgenic lines, with the relative efficiency reaching up to ~100%. Thus, thermo-stability of FLP recombinase in rice cells is critical for efficient site-specific recombination, and use of FLPe offers practical solutions to FLP-FRT-based biotechnology applications in plants.

Indexed as

Genetic MarkersBase SequenceDNA NucleotidyltransferasesFluoresceinsMolecular Sequence DataOryzaPhosphatidylethanolaminesPlant CellsPlants, Genetically ModifiedPlasmidsRecombination, GeneticTransgenesDNA NucleotidyltransferasesFLP recombinaseFluoresceinsGenetic MarkersN-fluoresceinylphosphatidylethanolaminePhosphatidylethanolamines

Identifiers

PMID21274659
OpenAlexW2051167016

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.