Evidence map›Paper›PMID 21274527›Full record

ArticleImmunogenetics2011

Functional analysis of frequently expressed Chinese rhesus macaque MHC class I molecules Mamu-A1*02601 and Mamu-B*08301 reveals HLA-A2 and HLA-A3 supertypic specificities.

Scott Southwood, Christopher Solomon, Ilka Hoof, Richard Rudersdorf, John Sidney, Bjoern Peters, Angela Wahl, Oriana Hawkins, William Hildebrand, Bianca R Mothé and 1 more

Abstract read
In one paragraph

Article in Immunogenetics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Review
  2. The HLA A03 Supertype and SeveralJournal of virology · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Scott SouthwoodDepartment of Vaccine Discovery, La Jolla Institute for Allergy and Immunology, La Jolla, CA 92037, USA.
Christopher Solomon
Ilka Hoof
Richard Rudersdorf
John Sidney
Bjoern Peters
Angela Wahl
Oriana Hawkins
William Hildebrand
Bianca R Mothé
Alessandro Sette

Funding

The Immunogenetics of Macaques Used in Biodefense ResearchR01AI070902 · NIAID · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI SETTE, ALESSANDRO · 2008 to 2011
$1.6M
MHC characterization in Chinese rhesus macaquesR15AI064175 · NIAID · CALIFORNIA STATE UNIVERSITY SAN MARCOS · PI MOTHE, BIANCA ROMINA · 2005 to 2013
$789k
NIAID NIH HHS R01 AI070902NIAID NIH HHS R01 AI070902-01A2NIAID NIH HHS R15 AI064175NIAID NIH HHS R15 AI064175-01
6 · The paper itself

Abstract

The Simian immunodeficiency virus (SIV)-infected Indian rhesus macaque (Macaca mulatta) is the most established model of HIV infection and AIDS-related research, despite the potential that macaques of Chinese origin is a more relevant model. Ongoing efforts to further characterize the Chinese rhesus macaques' major histocompatibility complex (MHC) for composition and function should facilitate greater utilization of the species. Previous studies have demonstrated that Chinese-origin M. mulatta (Mamu) class I alleles are more polymorphic than their Indian counterparts, perhaps inferring a model more representative of human MHC, human leukocyte antigen (HLA). Furthermore, the Chinese rhesus macaque class I allele Mamu-A1*02201, the most frequent allele thus far identified, has recently been characterized and shown to be an HLA-B7 supertype analog, the most frequent supertype in human populations. In this study, we have characterized two additional alleles expressed with high frequency in Chinese rhesus macaques, Mamu-A1*02601 and Mamu-B*08301. Upon the development of MHC-peptide-binding assays and definition of their associated motifs, we reveal that these Mamu alleles share peptide-binding characteristics with the HLA-A2 and HLA-A3 supertypes, respectively, the next most frequent human supertypes after HLA-B7. These data suggest that Chinese rhesus macaques may indeed be a more representative model of HLA gene diversity and function as compared to the species of Indian origin and therefore a better model for investigating human immune responses.

Indexed as

Disease Models, AnimalAmino Acid SequenceAnimalsBase SequenceCells, CulturedGene FrequencyHistocompatibility Antigens Class IHLA-A2 AntigenHLA-A3 AntigenMacaca mulattaMolecular Sequence DataSimian Immunodeficiency VirusHistocompatibility Antigens Class IHLA-A2 AntigenHLA-A3 AntigenMamu-A 01 antigenMamu-B 01 antigen, Macaca mulatta

Identifiers

PMID21274527
PMCPMC3068250

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.