Evidence map›Paper›PMID 21270827›Full record

ReviewGenes and immunity2011

Revisiting the T-cell receptor alpha/delta locus and possible associations with multiple sclerosis.

C T Watson, A E Para, M R Lincoln, S V Ramagopalan, S M Orton, K M Morrison, L Handunnetthi, A E Handel, M J Chao, J Morahan and 3 more

Abstract readReview
PubMed Publisher
In one paragraph

Review in Genes and immunity, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. The missing heritability in type 1 diabetes.Diabetes, obesity & metabolism · 2022
    Review
  2. Article
  3. Article
  4. High-throughput sequencing of immune repertoires in multiple sclerosis.Annals of clinical and translational neurology · 2016
    Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 2 countries.

C T WatsonDepartment of Biological Sciences, Simon Fraser University, Burnaby, British Columbia, Canada.
A E Para
M R Lincoln
S V Ramagopalan
S M Orton
K M Morrison
L Handunnetthi
A E Handel
M J Chao
J Morahan
A D Sadovnick
F Breden
G C Ebers
University of Oxford · GBJohn Radcliffe Hospital · GBCentre for Human Genetics · GBSimon Fraser University · CAUniversity of British Columbia · CA

Funding

Wellcome Trust
6 · The paper itself

Abstract

A role for T cells in the pathogenesis of multiple sclerosis (MS) is well supported, evidenced by myriad immunological studies, as well as the unequivocal genetic influence of the major histocompatibility complex (MHC). Despite many attempts, no convincing genetic associations have been made between T-cell receptor (TCR) gene loci and MS. However, these studies may not be definitive because of small sample sizes and under-representative marker coverage of the chromosomal regions being investigated. To explore potential roles between the TCR alpha locus and MS, we have genotyped a large family-based cohort, including 1360 affected individuals and 1659 of their unaffected first-degree relatives, at 40 single-nucleotide polymorphism (SNP) markers within the TCR alpha/delta locus. This represents the largest TCR alpha-MS study to date. From this screen, we identified three potential loci of interest in TCR alpha variable and constant gene regions using the transmission disequilibrium test. Although SNPs implicating each of these regions of interest will require genotyping in independent replication cohorts, these findings suggest a role for TCR gene polymorphisms in MS susceptibility. In the context of these findings we review the evidence.

Indexed as

Genes, T-Cell Receptor alphaGenes, T-Cell Receptor deltaCohort StudiesGenetic Predisposition to DiseaseGenotypeHumansMultiple SclerosisPolymorphism, Single NucleotideReceptors, Antigen, T-Cell, alpha-betaReceptors, Antigen, T-Cell, gamma-deltaT-LymphocytesReceptors, Antigen, T-Cell, alpha-betaReceptors, Antigen, T-Cell, gamma-delta

Identifiers

PMID21270827
OpenAlexW2040092728

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.