Evidence map›Paper›PMID 21270223›Full record

ArticleJournal of clinical microbiology2011

High failure rate of the ViroSeq HIV-1 genotyping system for drug resistance testing in Cameroon, a country with broad HIV-1 genetic diversity.

Avelin F Aghokeng, Eitel Mpoudi-Ngole, Julius E Chia, Elvine M Edoul, Eric Delaporte, Martine Peeters

Abstract readEvaluation Study
In one paragraph

Article in Journal of clinical microbiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Avelin F AghokengVirology Laboratory CREMER/IMPM/IRD, Rue Elig-Essono, P.O. Box 1857, Yaoundé, Cameroon. avelin.aghokeng@ird.fr
Eitel Mpoudi-Ngole
Julius E Chia
Elvine M Edoul
Eric Delaporte
Martine Peeters

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ViroSeq HIV-1 genotyping system is used in many African countries for drug resistance testing. In this study, we used a panel of diverse HIV-1 group M isolates circulating in Cameroon to show that the performance of this assay can be altered by the sequence variation of non-B HIV-1 strains that predominate in African settings.

Indexed as

Genetic VariationCameroonDrug Resistance, ViralGenotypeHIV-1HIV InfectionsHumansMicrobial Sensitivity TestsMolecular Sequence DataMolecular TypingSensitivity and SpecificitySequence Analysis, DNA

Identifiers

PMID21270223
PMCPMC3122788

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.