Evidence map›Paper›PMID 21265624›Full record

ArticleRadiation research2011

Murine Prkdc polymorphisms impact DNA-PKcs function.

Kristin M Fabre, Lila Ramaiah, Ryan C Dregalla, Christian Desaintes, Michael M Weil, Susan M Bailey, Robert L Ullrich

Open access · greenAbstract readComparative Study
In one paragraph

Article in Radiation research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
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  3. BRCA1 ensures genome integrity by eliminating estrogen-induced pathological topoisomerase II-DNA complexes.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Kristin M FabreDepartment of Environmental and Radiological Health Sciences, Colorado State University, Fort Collins, Colorado 80523, USA.
Lila Ramaiah
Ryan C Dregalla
Christian Desaintes
Michael M Weil
Susan M Bailey
Robert L Ullrich
Colorado State University · USEuropean Commission · BEThe University of Texas Medical Branch at Galveston · US

Funding

RADIOLOGICAL SCIENCES BASIC TO CANCER RESEARCHT32CA009236 · NCI · COLORADO STATE UNIVERSITY-FORT COLLINS · PI ULLRICH, ROBERT L · 1985 to 2007
$2.3M
CRCINOGENIC INTERACTIONS OF RADIATION AND CHEMICALSR01CA043322 · NCI · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI ULLRICH, ROBERT L · 1986 to 2007
$1.7M
NCI NIH HHS CA043322NCI NIH HHS CA09236NCI NIH HHS R01 CA043322NCI NIH HHS T32 CA009236
6 · The paper itself

Abstract

Polymorphic variants of DNA repair genes can increase the carcinogenic potential of exposure to ionizing radiation. Two single nucleotide polymorphisms (SNPs) in Prkdc, the gene encoding the DNA-dependent protein kinase catalytic subunit (DNA-PKcs), have been identified in BALB/c mice and linked to reduced DNA-PKcs activity and mammary cancer susceptibility. We examined three additional mouse strains to better define the roles of the BALB/c Prkdc SNPs (R2140C and M3844V). One is a congenic strain (C.B6) that has the C57BL/6 Prkdc allele on a BALB/c background, and the other is a congenic strain (B6.C) that has the BALB/c variant Prkdc allele on a C57BL/6 background. We also examined the LEWES mouse strain, which possesses only one of the BALB/c Prkdc SNPs (M3844V). Our results demonstrate that both Prkdc SNPs are responsible for deficient DNA-PKcs protein expression, DNA repair and telomere function, while the LEWES SNP affects only DNA-PKcs expression and repair capacity. These studies provide insight into the separation of function between the two BALB/c SNPs as well as direct evidence that SNPs positioned within Prkdc can significantly influence DNA-PKcs function involving DNA repair capacity, telomere end-capping, and potentially cancer susceptibility.

Indexed as

AnimalsDNADNA-Activated Protein KinaseDNA-Binding ProteinsDNA RepairMiceMice, Inbred BALB CMice, Inbred C57BLMice, TransgenicMutationNuclear ProteinsPolymorphism, Single NucleotideSpecies SpecificityDNADNA-Activated Protein KinaseDNA-Binding ProteinsNuclear ProteinsPrkdc protein, mouse

Identifiers

PMID21265624
PMCPMC3102216
OpenAlexW2067866257

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.