Evidence map›Paper›PMID 21264289›Full record

ArticlePloS one2011

Rapid and highly efficient method for scarless mutagenesis within the Salmonella enterica chromosome.

Kathrin Blank, Michael Hensel, Roman G Gerlach

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 71 papers.

0numbers the graph read from it
0cells of the map it votes in
71citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

71 citing papers in PubMed, 113 citations in OpenAlex.

  1. Article
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  6. Review
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  16. Subversion of a family of antimicrobial proteins byFrontiers in cellular and infection microbiology · 2024
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  18. Basal level of ppGpp coordinatesMicrobial cell (Graz, Austria) · 2023
    Article
  19. Recombineering in Non-Model Bacteria.Current protocols · 2022
    Article
  20. Article

11 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Kathrin BlankJunior Research Group 3, Robert Koch Institute, Wernigerode Branch, Wernigerode, Germany.
Michael Hensel
Roman G Gerlach
Robert Koch Institute · DEOsnabrück University · DE

Funding

DEPRESSION AND DISABILITY IN PATIENTS WITH HEART FAILUREK01MH001964 · NIMH · UNIVERSITY OF IOWA · PI TURVEY, CAROLYN L · 2000 to 2004
$633k
NIMH NIH HHS K01 MH001964
6 · The paper itself

Abstract

Direct manipulation of bacterial chromosomes by recombination-based techniques has become increasingly important for both cognitive and applied research. Here we demonstrate, for the first time, the combination of the Red recombinase system with I-SceI endonuclease-based selection of successful recombinants after electroporation with short synthetic oligonucleotides. We show the generation of scarless gene knockouts as well as site-directed mutagenesis using the Salmonella virulence-associated two component signaling system PhoPQ. The presented approach is very versatile for generating in-frame deletions, point mutations or insertions within bacterial chromosomes.

Indexed as

Chromosomes, BacterialMethodsMutagenesis, InsertionalMutagenesis, Site-DirectedPoint MutationRecombination, GeneticSalmonella entericaSequence Deletion

Identifiers

PMID21264289
PMCPMC3021506
OpenAlexW2060081322

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.