Evidence map›Paper›PMID 21262196›Full record

ArticleBiochimica et biophysica acta2011

Structural and functional roles of small group-conserved amino acids present on helix-H7 in the β(2)-adrenergic receptor.

Makoto Arakawa, Raja Chakraborty, Jasbir Upadhyaya, Markus Eilers, Philip J Reeves, Steven O Smith, Prashen Chelikani

Abstract read
In one paragraph

Article in Biochimica et biophysica acta, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Makoto ArakawaDepartment of Oral Biology, University of Manitoba, Winnipeg, MB R3E 0W4, Canada.
Raja Chakraborty
Jasbir Upadhyaya
Markus Eilers
Philip J Reeves
Steven O Smith
Prashen Chelikani
University of Manitoba · CAStony Brook University · USUniversity of Essex · GB

Funding

Structure and Activation Mechanism of the Visual Pigment RhodopsinR01GM041412 · NIGMS · YALE UNIVERSITY · PI SMITH, STEVEN OWEN · 1989 to 2014
$4.4M
500 MHz Solid-State NMR SpectrometerS10RR025562 · NCRR · STATE UNIVERSITY NEW YORK STONY BROOK · PI SMITH, STEVEN OWEN · 2009 to 2009
$500k
600 MHZ SOLID STATE NMR SPECTROMETERS10RR013889 · NCRR · STATE UNIVERSITY NEW YORK STONY BROOK · PI SMITH, STEVEN OWEN · 1999 to 1999
–
CIHR ROP92389NCRR NIH HHS S10 RR013889NCRR NIH HHS S10 RR025562NIGMS NIH HHS R01 GM041412NIGMS NIH HHS R01-GM-41412
6 · The paper itself

Abstract

Sequence analysis of the class A G protein-coupled receptors (GPCRs) reveals that most of the highly conserved sites are located in the transmembrane helices. A second level of conservation exists involving those residues that are conserved as a group characterized by small and/or weakly polar side chains (Ala, Gly, Ser, Cys, Thr). These positions can have group conservation levels of up to 99% across the class A GPCRs and have been implicated in mediating helix-helix interactions in membrane proteins. We have previously shown that mutation of group-conserved residues present on transmembrane helices H2-H4 in the β(2)-adrenergic receptor (β(2)-AR) can influence both receptor expression and function. We now target the group-conserved sites, Gly315(7.42) and Ser319(7.46), on H7 for structure-function analysis. Replacing Ser319(7.46) with smaller amino acids (Ala or Gly) did not influence the ability of the mutant receptors to bind to the antagonist dihydroalprenolol (DHA) but resulted in ~15-20% agonist-independent activity. Replacement of Ser319(7.46) with the larger amino acid leucine lowered the expression of the S319L mutant and its ability to bind DHA. Both the G315A and G315S mutants also exhibited agonist-independent signaling, while the G315L mutant did not show specific binding to DHA. These data indicate that Gly315(7.42) and Ser319(7.46) are stabilizing β(2)-AR in an inactive conformation. We discuss our results in the context of van der Waals interactions of Gly315(7.42) with Trp286(6.48) and hydrogen bonding interactions of Ser319(7.46) with amino acids on H1-H2-H7 and with structural water.

Indexed as

Protein Structure, SecondaryStructure-Activity RelationshipAdrenergic beta-AgonistsAdrenergic beta-AntagonistsAmino AcidsAmino Acid SubstitutionAnimalsBinding SitesChlorocebus aethiopsCOS CellsCricetinaeCyclic AMPDihydroalprenololGlycineHEK293 CellsHumansAdrenergic beta-AgonistsAdrenergic beta-AntagonistsAmino AcidsCyclic AMPDihydroalprenololGlycineIsoproterenolReceptors, Adrenergic, beta-2Serine

Identifiers

PMID21262196
PMCPMC3062665
OpenAlexW2005193937

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.