Evidence map›Paper›PMID 21261832›Full record

ArticleMicrobial biotechnology2008

Internal arsenite bioassay calibration using multiple bioreporter cell lines.

Anke Wackwitz, Hauke Harms, Antonis Chatzinotas, Uta Breuer, Christelle Vogne, Jan Roelof Van Der Meer

Open access · greenAbstract read
In one paragraph

Article in Microbial biotechnology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Sensitive and Specific Whole-Cell Biosensor for Arsenic Detection.Applied and environmental microbiology · 2019
    Article
  5. Article
  6. Article
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  9. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Anke WackwitzUFZ, Helmholtz Centre for Environmental Research, Department of Environmental Microbiology, 04318 Leipzig, Germany. anke.wackwitz@ufz.de
Hauke Harms
Antonis Chatzinotas
Uta Breuer
Christelle Vogne
Jan Roelof Van Der Meer
Helmholtz Centre for Environmental Research · DEUniversity of Lausanne · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bioassays with bioreporter bacteria are usually calibrated with analyte solutions of known concentrations that are analysed along with the samples of interest. This is done as bioreporter output (the intensity of light, fluorescence or colour) does not only depend on the target concentration, but also on the incubation time and physiological activity of the cells in the assay. Comparing the bioreporter output with standardized colour tables in the field seems rather difficult and error-prone. A new approach to control assay variations and improve application ease could be an internal calibration based on the use of multiple bioreporter cell lines with drastically different reporter protein outputs at a given analyte concentration. To test this concept, different Escherichia coli-based bioreporter strains expressing either cytochrome c peroxidase (CCP, or CCP mutants) or β-galactosidase upon induction with arsenite were constructed. The reporter strains differed either in the catalytic activity of the reporter protein (for CCP) or in the rates of reporter protein synthesis (for β-galactosidase), which, indeed, resulted in output signals with different intensities at the same arsenite concentration. Hence, it was possible to use combinations of these cell lines to define arsenite concentration ranges at which none, one or more cell lines gave qualitative (yes/no) visible signals that were relatively independent of incubation time or bioreporter activity. The discriminated concentration ranges would fit very well with the current permissive (e.g. World Health Organization) levels of arsenite in drinking water (10 µg l(-1)).

Indexed as

Genes, ReporterArsenitesbeta-GalactosidaseBiological AssayBiosensing TechniquesCalibrationCytochrome-c PeroxidaseEscherichia coliEscherichia coli ProteinsWater Pollutants, ChemicalarseniteArsenitesbeta-GalactosidaseCytochrome-c PeroxidaseEscherichia coli ProteinsWater Pollutants, Chemical

Identifiers

PMID21261832
PMCPMC3864448
OpenAlexW2070451437

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.