Evidence map›Paper›PMID 21261287›Full record

ArticleBiochemistry2011

Assembly of the base excision repair complex on abasic DNA and role of adenomatous polyposis coli on its functional activity.

Aruna S Jaiswal, Satya Narayan

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 25 citations in OpenAlex.

  1. Review
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  11. Cancer Stem Cells: A Moving Target.Current pathobiology reports · 2013
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Aruna S JaiswalDepartment of Anatomy and Cell Biology, University of Florida, Gainesville, Florida 32610, United States. ajaiswal@ufl.edu
Satya Narayan
University of Florida · US

Funding

Tumor suppressor APC and breast carcinogenesis.R01CA100247 · NCI · UNIVERSITY OF FLORIDA · PI NARAYAN, SATYA · 2003 to 2007
$1.4M
Involvement of APC in DNA RepairR01CA097031 · NCI · UNIVERSITY OF FLORIDA · PI NARAYAN, SATYA · 2003 to 2006
$1.0M
NCI NIH HHS R01 CA097031NCI NIH HHS R01-CA097031NCI NIH HHS R01 CA100247NCI NIH HHS R01-CA100247
6 · The paper itself

Abstract

The assembly and stability of base excision repair (BER) proteins in vivo with abasic DNA and the role of adenomatous polyposis coli (APC) protein in this process are currently unclear. We have studied the assembly of a multiprotein BER complex onto abasic DNA (F-DNA) and characterized the physical and functional activity of the associated proteins. We found that the BER complex contained all the essential components of the long-patch BER system, such as APE1, Pol-β, Fen1, and DNA ligase I. Interestingly, wild-type APC was also present in the BER complex. Kinetics of the assembly of BER proteins onto the F-DNA were rapid and appeared in sequential order depending upon their requirement in the repair process. The presence of wild-type APC in the BER complex caused a decrease in the level of assembly of BER proteins and negatively affected long-patch BER. These results suggest that major BER proteins in the complex are assembled onto F-DNA and are competent in performing DNA repair. Wild-type APC in the BER complex reduces the repair activity, probably because of interaction with multiple components of the system.

Indexed as

DNA RepairAdenomatous Polyposis Coli ProteinCell Line, TumorDNADNA Ligase ATPDNA LigasesGenes, APCHumansKineticsAdenomatous Polyposis Coli ProteinDNADNA Ligase ATPDNA LigasesLIG1 protein, human

Identifiers

PMID21261287
PMCPMC3621719
OpenAlexW2079978576

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.