Evidence map›Paper›PMID 21255578›Full record

ArticleJournal of immunological methods2011

Impact of blood processing variations on natural killer cell frequency, activation, chemokine receptor expression and function.

Vivek Naranbhai, Pat Bartman, Dudu Ndlovu, Pamela Ramkalawon, Thumbi Ndung'u, Douglas Wilson, Marcus Altfeld, William H Carr

Abstract readComparative Study
In one paragraph

Article in Journal of immunological methods, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 41 citations in OpenAlex.

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  7. A Method of Targeted Cell Isolation via Glass Surface Functionalization.Journal of visualized experiments : JoVE · 2016
    Article
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  10. Increased frequencies of CD8Journal of the International AIDS Society · 2016
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Vivek NaranbhaiHIV Pathogenesis Programme, Doris Duke Medical Research Institute, Nelson R Mandela School of Medicine, University of KwaZulu Natal, Durban, South Africa.
Pat Bartman
Dudu Ndlovu
Pamela Ramkalawon
Thumbi Ndung'u
Douglas Wilson
Marcus Altfeld
William H Carr
University of KwaZulu-Natal · ZAEdendale Hospital · ZACentre for the AIDS Programme of Research in South Africa · ZA

Funding

AIDS-Restrictive Innate Immune MechanismsK01TW007793 · FIC · MASSACHUSETTS GENERAL HOSPITAL · PI CARR, WILLIAM H · 2008 to 2011
$489k
FIC NIH HHS K01-TW00703-01A1FIC NIH HHS K01 TW007793
6 · The paper itself

Abstract

Understanding the role of natural killer (NK) cells in human disease pathogenesis is crucial and necessitates study of patient samples directly ex vivo. Manipulation of whole blood by density gradient centrifugation or delays in sample processing due to shipping, however, may lead to artifactual changes in immune response measures. Here, we assessed the impact of density gradient centrifugation and delayed processing of both whole blood and peripheral blood mononuclear cells (PBMC) at multiple timepoints (2-24 h) on flow cytometric measures of NK cell frequency, activation status, chemokine receptor expression, and effector functions. We found that density gradient centrifugation activated the NK cells and modified the chemokine receptor expression. Delays in processing beyond 8h activated NK cells in PBMC but not in whole blood. Likewise, processing delays decreased chemokine receptor (CCR4 and CCR7) expression in both PBMC and whole blood. Finally, delays in processing PBMC were associated with a decreased ability of NK cells to degranulate (as measured by CD107a expression) or secrete cytokines (IFN-γ and TNF-α). In summary, our findings suggest that density gradient centrifugation and delayed processing of PBMC can alter measures of clinically relevant NK cell characteristics including effector functions; and therefore should be taken into account in designing clinical research studies.

Indexed as

AdultBlood Specimen CollectionCell DegranulationCell SeparationCentrifugation, Density GradientFemaleFlow CytometryHumansKiller Cells, NaturalLeukocytes, MononuclearLymphocyte ActivationPhlebotomyReceptors, ChemokineTime FactorsYoung AdultReceptors, Chemokine

Identifiers

PMID21255578
PMCPMC3051017
OpenAlexW2038939047

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.