Evidence map›Paper›PMID 21253573›Full record

ArticlePLoS pathogens2011

Structural basis for the recognition of cellular mRNA export factor REF by herpes viral proteins HSV-1 ICP27 and HVS ORF57.

Richard B Tunnicliffe, Guillaume M Hautbergue, Priti Kalra, Brian R Jackson, Adrian Whitehouse, Stuart A Wilson, Alexander P Golovanov

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 49 citations in OpenAlex.

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  15. Multiple nuclear-replicating viruses require the stress-induced protein ZC3H11A for efficient growth.Proceedings of the National Academy of Sciences of the United States of America · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Richard B TunnicliffeFaculty of Life Sciences and Manchester Interdisciplinary Biocentre, University of Manchester, Manchester, United Kingdom.
Guillaume M Hautbergue
Priti Kalra
Brian R Jackson
Adrian Whitehouse
Stuart A Wilson
Alexander P Golovanov
University of Manchester · GBUniversity of Sheffield · GBInstitute of Structural and Molecular Biology · GBUniversity of Leeds · GB

Funding

Biotechnology and Biological Sciences Research Council BB/E025293/1Biotechnology and Biological Sciences Research Council BB/F000588/1Medical Research Council MC_U117533887Wellcome Trust
6 · The paper itself

Abstract

The herpesvirus proteins HSV-1 ICP27 and HVS ORF57 promote viral mRNA export by utilizing the cellular mRNA export machinery. This function is triggered by binding to proteins of the transcription-export (TREX) complex, in particular to REF/Aly which directs viral mRNA to the TAP/NFX1 pathway and, subsequently, to the nuclear pore for export to the cytoplasm. Here we have determined the structure of the REF-ICP27 interaction interface at atomic-resolution and provided a detailed comparison of the binding interfaces between ICP27, ORF57 and REF using solution-state NMR. Despite the absence of any obvious sequence similarity, both viral proteins bind on the same site of the folded RRM domain of REF, via short but specific recognition sites. The regions of ICP27 and ORF57 involved in binding by REF have been mapped as residues 104-112 and 103-120, respectively. We have identified the pattern of residues critical for REF/Aly recognition, common to both ICP27 and ORF57. The importance of the key amino acid residues within these binding sites was confirmed by site-directed mutagenesis. The functional significance of the ORF57-REF/Aly interaction was also probed using an ex vivo cytoplasmic viral mRNA accumulation assay and this revealed that mutants that reduce the protein-protein interaction dramatically decrease the ability of ORF57 to mediate the nuclear export of intronless viral mRNA. Together these data precisely map amino acid residues responsible for the direct interactions between viral adaptors and cellular REF/Aly and provide the first molecular details of how herpes viruses access the cellular mRNA export pathway.

Indexed as

Amino Acid SequenceBinding SitesDNA-(Apurinic or Apyrimidinic Site) LyaseExodeoxyribonucleasesHerpesvirus 1, HumanHumansImmediate-Early ProteinsMolecular Sequence DataPhosphoproteinsProtein BindingProtein Interaction MappingRepressor ProteinsRNA, MessengerRNA, ViralTrans-ActivatorsAPEX1 protein, humanDNA-(Apurinic or Apyrimidinic Site) LyaseExodeoxyribonucleasesICP27 protein, human herpesvirus 1Immediate-Early ProteinsORF57 protein, Herpesvirus saimiriPhosphoproteinsRepressor ProteinsRNA, MessengerRNA, Viralthree prime repair exonuclease 1Trans-Activators

Identifiers

PMID21253573
PMCPMC3017119
OpenAlexW2011797369

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.