Evidence map›Paper›PMID 21251259›Full record

ArticleBMC microbiology2011

Patterns and regulation of ribosomal RNA transcription in Borrelia burgdorferi.

Julia V Bugrysheva, Henry P Godfrey, Ira Schwartz, Felipe C Cabello

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.4field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Julia V BugryshevaDepartment of Microbiology and Immunology, Basic Science Building, New York Medical College, Valhalla, NY 10595, USA.
Henry P Godfrey
Ira Schwartz
Felipe C Cabello
New York Medical College · US

Funding

Regulated expression of B. burgdorferi virulence genesR01AI048856 · NIAID · NEW YORK MEDICAL COLLEGE · PI CABELLO, FELIPE CARDENAS · 2001 to 2010
$2.6M
Stringent response and bmp expression in B. burgdorferiR01AI043063 · NIAID · NEW YORK MEDICAL COLLEGE · PI CABELLO, FELIPE CARDENAS · 1998 to 2007
$2.2M
NIAID NIH HHS AI 48856NIAID NIH HHS R01 AI043063
6 · The paper itself

Abstract

backgroundBorrelia burgdorferi contains one 16S and two tandem sets of 23S-5S ribosomal (r) RNA genes whose patterns of transcription and regulation are unknown but are likely to be critical for survival and persistence in its hosts.

resultsRT-PCR of B. burgdorferi N40 and B31 revealed three rRNA region transcripts: 16S rRNA-alanine transfer RNA (tRNA Ala); tRNA Ile; and both sets of 23S-5S rRNA. At 34°C, there were no differences in growth rate or in accumulation of total protein, DNA and RNA in B31 cultured in Barbour-Stoenner-Kelly (BSK)-H whether rabbit serum was present or not. At 23°C, B31 grew more slowly in serum-containing BSK-H than at 34°C. DNA per cell was higher in cells in exponential as compared to stationary phase at either temperature; protein per cell was similar at both temperatures in both phases. Similar amounts of rRNA were produced in exponential phase at both temperatures, and rRNA was down-regulated in stationary phase at either temperature. Interestingly, a rel Bbu deletion mutant unable to generate (p)ppGpp did not down-regulate rRNA at transition to stationary phase in serum-containing BSK-H at 34°C, similar to the relaxed phenotype of E. coli relA mutants.

conclusionsWe conclude that rRNA transcription in B. burgdorferi is complex and regulated both by growth phase and by the stringent response but not by temperature-modulated growth rate.

Indexed as

Genes, rRNATranscription, GeneticAnimalsBorrelia burgdorferiCulture MediaDNA, BacterialDNA, RibosomalEscherichia coliGene Expression Regulation, BacterialMolecular Sequence DataPolymerase Chain ReactionRabbitsRNA, BacterialRNA, Ribosomal, 16SRNA, Ribosomal, 23SRNA, Ribosomal, 5SCulture MediaDNA, BacterialDNA, RibosomalRNA, BacterialRNA, Ribosomal, 16SRNA, Ribosomal, 23SRNA, Ribosomal, 5SRNA, Transfer, Ala

Identifiers

PMID21251259
PMCPMC3037291
OpenAlexW2016763232

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.