Evidence map›Paper›PMID 21249181›Full record

ArticlePLoS genetics2011

Friedreich's ataxia (GAA)n•(TTC)n repeats strongly stimulate mitotic crossovers in Saccharomyces cerevisae.

Wei Tang, Margaret Dominska, Patricia W Greenwell, Zachary Harvanek, Kirill S Lobachev, Hyun-Min Kim, Vidhya Narayanan, Sergei M Mirkin, Thomas D Petes

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 44 citations in OpenAlex.

  1. Emerging drivers of DNA repeat expansions.Biochemical Society transactions · 2025
    Review
  2. Article
  3. Formation of chromosomal rearrangements inbioRxiv : the preprint server for biology · 2025
    Article
  4. Recurrent DNA nicks drive massive expansions of (GAA)Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  5. Review
  6. Mitotic recombination in yeast: what we know and what we don't know.Current opinion in genetics & development · 2021
    Review
  7. Replication-independent instability of Friedreich's ataxia GAA repeats during chronological aging.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Review
  13. Review
  14. GC content elevates mutation and recombination rates in the yeastProceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  15. Article
  16. Review
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Wei TangDepartment of Molecular Genetics and Microbiology, Duke University, Durham, North Carolina, United States of America.
Margaret Dominska
Patricia W Greenwell
Zachary Harvanek
Kirill S Lobachev
Hyun-Min Kim
Vidhya Narayanan
Sergei M Mirkin
Thomas D Petes
Duke University · USGeorgia Institute of Technology · USTufts University · US

Funding

RECOMBINATION IN YEASTR01GM024110 · NIGMS · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI PETES, THOMAS · 1985 to 2015
$6.1M
INSTABILITY OF SIMPLE REPETITIVE DNA SEQUENCES IN YEASTR01GM052319 · NIGMS · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI PETES, THOMAS · 1995 to 2015
$4.9M
REPLICATION OF SIMPLE DNA REPEATSR01GM060987 · NIGMS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI MIRKIN, SERGEI · 2001 to 2017
$4.9M
Mechanism and consequences of GAA repeat-mediated chromosomal fragility in yeastR01GM082950 · NIGMS · GEORGIA INSTITUTE OF TECHNOLOGY · PI LOBACHEV, KIRILL S · 2008 to 2011
$1.2M
Environmental and genetic regulation of copy number variation (CNV)RC1ES018091 · NIEHS · DUKE UNIVERSITY · PI PETES, THOMAS · 2009 to 2010
$993k
NIEHS NIH HHS 1RC1ES018091NIEHS NIH HHS RC1 ES018091NIGMS NIH HHS GM082950NIGMS NIH HHS GM24110NIGMS NIH HHS GM52319NIGMS NIH HHS GM60987NIGMS NIH HHS R01 GM024110NIGMS NIH HHS R01 GM052319NIGMS NIH HHS R01 GM060987NIGMS NIH HHS R01 GM082950
6 · The paper itself

Abstract

Expansions of trinucleotide GAA•TTC tracts are associated with the human disease Friedreich's ataxia, and long GAA•TTC tracts elevate genome instability in yeast. We show that tracts of (GAA)(230)•(TTC)(230) stimulate mitotic crossovers in yeast about 10,000-fold relative to a "normal" DNA sequence; (GAA)(n)•(TTC)(n) tracts, however, do not significantly elevate meiotic recombination. Most of the mitotic crossovers are associated with a region of non-reciprocal transfer of information (gene conversion). The major class of recombination events stimulated by (GAA)(n)•(TTC)(n) tracts is a tract-associated double-strand break (DSB) that occurs in unreplicated chromosomes, likely in G1 of the cell cycle. These findings indicate that (GAA)(n)•(TTC)(n) tracts can be a potent source of loss of heterozygosity in yeast.

Indexed as

MitosisTrinucleotide RepeatsChromosomes, FungalDNA Breaks, Double-StrandedDNA ReplicationGene ConversionSaccharomyces cerevisiae

Identifiers

PMID21249181
PMCPMC3020933
OpenAlexW2079296555

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.