Evidence map›Paper›PMID 21248748›Full record

ArticleEuropean journal of human genetics : EJHG2011

The phenotype of recurrent 10q22q23 deletions and duplications.

Bregje W M van Bon, Jorune Balciuniene, Gary Fruhman, Sandesh Chakravarthy Sreenath Nagamani, Diane L Broome, Elizabeth Cameron, Danielle Martinet, Eliane Roulet, Sebastien Jacquemont, Jacques S Beckmann and 22 more

Open access · bronzeAbstract readCase Reports
In one paragraph

Article in European journal of human genetics : EJHG, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 64 citations in OpenAlex.

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  9. Identification of clinically actionable variants from genome sequencing of families with congenital heart disease.Genetics in medicine : official journal of the American College of Medical Genetics · 2019
    Article
  10. Article
  11. Toward the Language Oscillogenome.Frontiers in psychology · 2018
    Article
  12. Copy Number Variation Disorders.Current genetic medicine reports · 2017
    Article
  13. Article
  14. Article
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  16. Aortic dilation, genetic testing, and associated diagnoses.Genetics in medicine : official journal of the American College of Medical Genetics · 2016
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

32 authors at 15 institutions in 5 countries.

Bregje W M van BonDepartment of Human Genetics, Radboud University Nijmegen Medical Centre, Nijmegen, The Netherlands. B.vanBon@antrg.umcn.nl
Jorune Balciuniene
Gary Fruhman
Sandesh Chakravarthy Sreenath Nagamani
Diane L Broome
Elizabeth Cameron
Danielle Martinet
Eliane Roulet
Sebastien Jacquemont
Jacques S Beckmann
Mira Irons
Lorraine Potocki
Brendan Lee
Sau Wai Cheung
Ankita Patel
Melissa Bellini
Angelo Selicorni
Roberto Ciccone
Margherita Silengo
Annalisa Vetro
Nine V Knoers
Nicole de Leeuw
Rolph Pfundt
Barry Wolf
Petr Jira
Swaroop Aradhya
Pawel Stankiewicz
Han G Brunner
Orsetta Zuffardi
Scott B Selleck
James R Lupski
Bert B A de Vries
Baylor College of Medicine · USRadboud University Nijmegen · NLUniversity Hospital of Lausanne · CH5T Torino (Italy) · ITHenry Ford Health System · USUniversity of Pavia · ITAzienda Ospedaliera San Gerardo · ITBoston Children's Hospital · USJeroen Bosch Ziekenhuis · NLMedical Genetics Center · DEMicroprobes (United States) · USOspedale San Carlo · ITTemple University · USTexas Children's Hospital · USUniversity of Minnesota · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genomic architecture of the 10q22q23 region is characterised by two low-copy repeats (LCRs3 and 4), and deletions in this region appear to be rare. We report the clinical and molecular characterisation of eight novel deletions and six duplications within the 10q22.3q23.3 region. Five deletions and three duplications occur between LCRs3 and 4, whereas three deletions and three duplications have unique breakpoints. Most of the individuals with the LCR3-4 deletion had developmental delay, mainly affecting speech. In addition, macrocephaly, mild facial dysmorphisms, cerebellar anomalies, cardiac defects and congenital breast aplasia were observed. For congenital breast aplasia, the NRG3 gene, known to be involved in early mammary gland development in mice, is a putative candidate gene. For cardiac defects, BMPR1A and GRID1 are putative candidate genes because of their association with cardiac structure and function. Duplications between LCRs3 and 4 are associated with variable phenotypic penetrance. Probands had speech and/or motor delays and dysmorphisms including a broad forehead, deep-set eyes, upslanting palpebral fissures, a smooth philtrum and a thin upper lip. In conclusion, duplications between LCRs3 and 4 on 10q22.3q23.2 may lead to a distinct facial appearance and delays in speech and motor development. However, the phenotypic spectrum is broad, and duplications have also been found in healthy family members of a proband. Reciprocal deletions lead to speech and language delay, mild facial dysmorphisms and, in some individuals, to cerebellar, breast developmental and cardiac defects.

Indexed as

Abnormalities, MultipleAdaptor Proteins, Signal TransducingAnimalsBody Dysmorphic DisordersBone Morphogenetic Protein Receptors, Type IChildChromosome DeletionChromosomes, Human, Pair 10Developmental DisabilitiesDNA Copy Number VariationsFemaleHumansLanguage Development DisordersMaleMegalencephalyMiceAdaptor Proteins, Signal TransducingBMPR1A protein, humanBone Morphogenetic Protein Receptors, Type IGRAP2 protein, humanNatural Cytotoxicity Triggering Receptor 3NCR3 protein, human

Identifiers

PMID21248748
PMCPMC3060324
OpenAlexW2063206230

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.