Evidence map›Paper›PMID 21248725›Full record

ArticleMucosal immunology2011

Epigenetic regulation of human β-defensin 2 and CC chemokine ligand 20 expression in gingival epithelial cells in response to oral bacteria.

L Yin, W O Chung

Open access · bronzeAbstract read
In one paragraph

Article in Mucosal immunology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 69 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed, 2 pooled it
6.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

69 citing papers in PubMed, 2 syntheses or guidelines pooled it, 132 citations in OpenAlex.

  1. Pooled it
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  17. Infection and immunity · 2022
    Article
  18. Review
  19. Inhibitors of DNA Methylation.Advances in experimental medicine and biology · 2022
    Review
  20. Review

9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

L YinDepartment of Oral Biology, University of Washington, Seattle, Washington, USA. leiyin@u.washington.edu
W O Chung
University of Washington · US

Funding

Regulation of Beta-Defensin Expression in Oral EpitheliaR01DE013573 · NIDCR · UNIVERSITY OF WASHINGTON · PI CHUNG, WHASUN OH · 2000 to 2009
$3.1M
Balancing expression of PRRs in epithelial innate immune responses to bacteriaR01DE019632 · NIDCR · UNIVERSITY OF WASHINGTON · PI CHUNG, WHASUN OH · 2009 to 2013
$1.7M
NIDCR NIH HHS DE 19632NIDCR NIH HHS R01 DE 013573NIDCR NIH HHS R01 DE013573NIDCR NIH HHS R01 DE019632
6 · The paper itself

Abstract

Gingival epithelia utilize multiple signaling pathways to regulate innate immune responses to various oral bacteria, but little is understood about how these bacteria alter epithelial epigenetic status. In this study we report that DNA methyltransferase (DNMT1) and histone deacetylase expression were decreased in gingival epithelial cells treated with oral pathogen Porphyromonas gingivalis and nonpathogen Fusobacterium nucleatum. Pretreatment with trichostatin A and sodium butyrate, which increase acetylation of chromatin histones, significantly enhanced the gene expression of antimicrobial proteins human β-defensin 2 (hBD2) and CC chemokine ligand 20 (CCL20) in response to both bacterial challenges. Pretreatment with DNMT inhibitor 5'-azacytidine increased hBD2 and CCL20 expression in response to F. nucleatum, but not to P. gingivalis. Furthermore, we observed a differential pattern of protein levels of H3K4me3, which has been associated with chromatin remodeling and activation of gene transcription, in response to P. gingivalis vs. F. nucleatum. This study provides a new insight into the bacteria-specific innate immune responses via epigenetic regulation.

Indexed as

EpigenomicsEpithelial CellsGene Expression RegulationBacteroidaceae Infectionsbeta-DefensinsChemokine CCL20ChromatinDNA (Cytosine-5-)-Methyltransferase 1DNA (Cytosine-5-)-MethyltransferasesDNA MethylationFusobacterium nucleatumGingivaHistone Deacetylase 1Histone Deacetylase 2HistonesHumansbeta-DefensinsChemokine CCL20ChromatinDEFB4A protein, humanDNA (Cytosine-5-)-Methyltransferase 1DNA (Cytosine-5-)-MethyltransferasesDNMT1 protein, humanHistone Deacetylase 1Histone Deacetylase 2HistonesInterleukin-8RNA, Messenger

Identifiers

PMID21248725
PMCPMC3118861
OpenAlexW2021168889

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.