Evidence map›Paper›PMID 21246238›Full record

ArticleFunctional & integrative genomics2011

Mitochondrial proteomics analysis of tumorigenic and metastatic breast cancer markers.

Yi-Wen Chen, Hsiu-Chuan Chou, Ping-Chiang Lyu, Hsien-Sheng Yin, Fang-Liang Huang, Wun-Shaing Wayne Chang, Chiao-Yuan Fan, I-Fan Tu, Tzu-Chia Lai, Szu-Ting Lin and 4 more

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Article in Functional & integrative genomics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. Review
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  5. Review
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  8. Review
  9. Article
  10. Article
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  13. Multifaceted role of prohibitin in cell survival and apoptosis.Apoptosis : an international journal on programmed cell death · 2015
    Review
  14. Article
  15. Identification and validation of dysregulated metabolic pathways in metastatic renal cell carcinoma.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2014
    Article
  16. Article
  17. Article
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 1 country.

Yi-Wen ChenInstitute of Bioinformatics and Structural Biology and Department of Medical Sciences, National Tsing Hua University, No. 101, Kuang-Fu Rd. Sec. 2, Hsinchu, 30013, Taiwan.
Hsiu-Chuan Chou
Ping-Chiang Lyu
Hsien-Sheng Yin
Fang-Liang Huang
Wun-Shaing Wayne Chang
Chiao-Yuan Fan
I-Fan Tu
Tzu-Chia Lai
Szu-Ting Lin
Ying-Chieh Lu
Chieh-Lin Wu
Shun-Hong Huang
Hong-Lin Chan
National Tsing Hua University · TWNational Health Research Institutes · TWNational Hsinchu University of Education · TWTaichung Veterans General Hospital · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mitochondria are key organelles in mammary cells responsible for several cellular functions including growth, division, and energy metabolism. In this study, mitochondrial proteins were enriched for proteomics analysis with the state-of-the-art two-dimensional differential gel electrophoresis and matrix-assistant laser desorption ionization-time-of-flight mass spectrometry strategy to compare and identify the mitochondrial protein profiling changes between three breast cell lines with different tumorigenicity and metastasis. The proteomics results demonstrate more than 1,500 protein features were resolved from the equal amount pooled from three purified mitochondrial proteins, and 125 differentially expressed spots were identified by their peptide finger print, in which, 33 identified proteins belonged to mitochondrial proteins. Eighteen out of these 33 identified mitochondrial proteins such as SCaMC-1 have not been reported in breast cancer research to our knowledge. Additionally, mitochondrial protein prohibitin has shown to be differentially distributed in mitochondria and in nucleus for normal breast cells and breast cancer cell lines, respectively. To sum up, our approach to identify the mitochondrial proteins in various stages of breast cancer progression and the identified proteins may be further evaluated as potential breast cancer markers in prognosis and therapy.

Indexed as

ProteomicsBiomarkers, TumorBreast NeoplasmsCell Line, TumorFemaleGene Expression Regulation, NeoplasticHumansMitochondriaMitochondrial ProteinsNeoplasm MetastasisNeoplasm StagingProhibitinsRepressor ProteinsSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationTwo-Dimensional Difference Gel ElectrophoresisBiomarkers, TumorMitochondrial ProteinsProhibitinsRepressor Proteins

Identifiers

PMID21246238
OpenAlexW2048845791

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.