ArticleHeredity2011
Association genetics of carbon isotope discrimination, height and foliar nitrogen in a natural population of Pinus taeda L.
Article in Heredity, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
24 citing papers in PubMed, 83 citations in OpenAlex.
- Constitutive and inducible oleoresin defenses share genetic architectures and mechanisms in Pinus taeda.The New phytologist · 2026Article
- Genome-wide association analysis reveal candidate genes and haplotypes related to root weight in cucumber (Frontiers in plant science · 2024Article
- Differences in heat tolerance, water use efficiency and growth among Douglas-fir families and varieties evidenced by GWAS and common garden studies.AoB PLANTS · 2023Article
- Article
- Genome-wide association identifies candidate genes for drought tolerance in coast redwood and giant sequoia.The Plant journal : for cell and molecular biology · 2022Article
- Article
- Toward genomic selection inApplications in plant sciences · 2021Article
- Extensive Variation in Drought-Induced Gene Expression Changes Between Loblolly Pine Genotypes.Frontiers in genetics · 2021Article
- Genetic Variation in Drought-Tolerance Traits and Their Relationships to Growth inFrontiers in plant science · 2021Article
- Comparative Study of Pine Reference Genomes Reveals Transposable Element Interconnected Gene Networks.Genes · 2020Article
- Detecting the genetic basis of local adaptation in loblolly pine (Ecology and evolution · 2019Article
- Exploring the genetic basis of gene transcript abundance and metabolite levels in loblolly pine (Pinus taeda L.) using association mapping and network construction.BMC genetics · 2018Article
- Quantitative Genetics and Genomics Converge to Accelerate Forest Tree Breeding.Frontiers in plant science · 2018Review
- Association genetics of phenolic needle compounds in Norway spruce with variable susceptibility to needle bladder rust.Plant molecular biology · 2017Article
- Exome genotyping, linkage disequilibrium and population structure in loblolly pine (Pinus taeda L.).BMC genomics · 2016Article
- Genetic architecture of wood properties based on association analysis and co-expression networks in white spruce.The New phytologist · 2016Article
- Linkage and Association Mapping for Two Major Traits Used in the Maritime Pine Breeding Program: Height Growth and Stem Straightness.PloS one · 2016Article
- A Consensus Genetic Map for Pinus taeda and Pinus elliottii and Extent of Linkage Disequilibrium in Two Genotype-Phenotype Discovery Populations of Pinus taeda.G3 (Bethesda, Md.) · 2015Article
- The evolutionary genetics of the genes underlying phenotypic associations for loblolly pine (Pinus taeda, Pinaceae).Genetics · 2013Article
- Potential for evolutionary responses to climate change - evidence from tree populations.Global change biology · 2013Review
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
6 authors at 3 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Loblolly pine, Pinus taeda L., is one of the most widely planted, commercially and ecologically important tree species in North America. We took an association genetics approach, using an unimproved population of 380 clonally replicated unrelated trees, to test 3,938 single nucleotide polymorphisms (SNPs) in as many genes for association with phenotypic variation in carbon isotope discrimination, foliar nitrogen concentration and total tree height after two growing seasons. Best linear unbiased prediction (BLUP) was used with a spatial adjustment to remove environmental variation from phenotypic data derived from a common garden experiment. After correction for multiple testing, a total of 14 SNPs were associated with the traits of carbon isotope discrimination (n = 7), height (n = 1) and foliar nitrogen concentration (n = 6) using 380 clones. Tails of the population phenotypic distribution were compared for allele frequency differences, revealing 10 SNPs with allele frequency in at least one tail significantly different from the overall population. Eight associated SNPs were in sequences similar to known genes, such as an AP2 transcription factor related to carbon isotope discrimination and glutamate decarboxylase associated with foliar nitrogen concentration, and others were from unknown genes without homologs in Arabidopsis.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.