Evidence map›Paper›PMID 21243526›Full record

ArticlePhotosynthesis research2011

Regulation of the expression of H43/Fea1 by multi-signals.

Masato Baba, Yutaka Hanawa, Iwane Suzuki, Yoshihiro Shiraiwa

Abstract read
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In one paragraph

Article in Photosynthesis research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Crystallographic analysis and phasing of iron-assimilating protein 1 (FEA1) from Chlamydomonas reinhardtii.Acta crystallographica. Section F, Structural biology communications · 2021
    Article
  2. Elucidation and genetic intervention of COJournal of biosciences · 2020
    Article
  3. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Masato BabaGraduate School of Life and Environmental Sciences, University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Japan.
Yutaka Hanawa
Iwane Suzuki
Yoshihiro Shiraiwa
University of Tsukuba · JPNational Institute of Advanced Industrial Science and Technology · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The composition of extracellular proteins is known to be drastically changed in the unicellular green alga Chlamydomonas reinhardtii when the cells are transferred from ambient CO(2) to elevated CO(2) conditions. We previously observed very high production of the H43/Fea1 protein under high-CO(2) (0.3-3% in air) conditions. In addition, H43/Fea1 gene expression was reported to be induced under iron-deficient and cadmium-excess conditions, but it remains unclear how gene expression is regulated by multiple signals. To elucidate the regulatory mechanism of H43/Fea1 expression, this study intended to identify a high-CO(2)-responsive cis-element in a wall-deficient strain C. reinhardtti CC-400. Cells incubated in the presence of acetate in the dark, namely heterotrophically generated high-CO(2) conditions, were used for inducing H43/Fea1 gene expression following our previous study (Hanawa et al., Plant Cell Physiol 48:299-309, 2007) in Fe-sufficient and Cd-deficient medium to prevent the generation of other signals. First, we constructed a reporter assay system using transformants constructed by introducing genes with series of 5'-deleted upstream sequences of H43/Fea1 that were fused to a coding sequence of the Ars for arylsulfatase2 reporter gene. Consequently, the high-CO(2)-responsive cis-element (HCRE) was found to be located at a -537/-370 upstream region from the transcriptional initiation site of H43/Fea1. However, it still remains possible that a -724/-537 upstream region may also have a significant role in activating gene expression regulated by high-CO(2). Remarkably, a -925/-370 upstream region could successfully activate the Ars reporter gene under heterotrophically generated high-CO(2) conditions even when the sequence containing two Fe-deficiency-responsive elements was completely deleted. These results clearly showed that H43/Fea1 expression is regulated by high-CO(2) signal independently via the HCRE that is located distantly from Fe-deficient-signal responsive element, indicating that H43/Fea1 is a multi-signal-regulated gene.

Indexed as

ArylsulfatasesCarbon DioxideChlamydomonas reinhardtiiGene Expression Regulation, PlantGenes, ReporterIronPeriplasmic ProteinsPlant ProteinsPromoter Regions, GeneticRNA, MessengerRNA, PlantSequence DeletionSignal TransductionTranscription, GeneticTranscription Initiation SiteTransformation, GeneticArylsulfatasesCarbon DioxideIronPeriplasmic ProteinsPlant ProteinsRNA, MessengerRNA, Plant

Identifiers

PMID21243526
OpenAlexW1980898906

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.