Evidence map›Paper›PMID 21242524›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2011

Mismatch repair proteins MSH2, MLH1, and EXO1 are important for class-switch recombination events occurring in B cells that lack nonhomologous end joining.

Jennifer Eccleston, Catherine Yan, Karen Yuan, Frederick W Alt, Erik Selsing

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 41 citations in OpenAlex.

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  10. Germline-activating mutations inThe Journal of experimental medicine · 2018
    Article
  11. Review
  12. Histone methyltransferase MMSET promotes AID-mediated DNA breaks at the donor switch region during class switch recombination.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  13. Review
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  18. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Jennifer EcclestonDepartment of Pathology, Tufts University School of Medicine, Boston, MA 02111, USA.
Catherine Yan
Karen Yuan
Frederick W Alt
Erik Selsing
Tufts University · USBeth Israel Deaconess Medical Center · USHarvard University · US

Funding

Mechanisms that Regulate Antibody Class Switch Recombination and Somatic HypermutationR37AI077595 · NIAID · BOSTON CHILDREN'S HOSPITAL · PI Frederick W. Alt · 2019 to 2026
$4.6M
Molecular Mechanisms of Class Switch RecombinationR01AI077595 · NIAID · BOSTON CHILDREN'S HOSPITAL · PI ALT, FREDERICK W. · 2009 to 2018
$4.3M
IMMUNITY IN TRANSGENIC MICER01AI024465 · NIAID · TUFTS UNIVERSITY BOSTON · PI SELSING, ERIK · 1987 to 2010
$3.8M
Howard Hughes Medical InstituteNIAID NIH HHS AI077595NIAID NIH HHS AI24465NIAID NIH HHS R01 AI024465NIAID NIH HHS R01 AI077595NIAID NIH HHS R37 AI077595
6 · The paper itself

Abstract

In the absence of core nonhomologous end-joining (NHEJ) factors, Ab gene class-switch recombination (CSR) uses an alternative end-joining (A-EJ) pathway to recombine switch (S) region DNA breaks. Previous reports showing decreased S-junction microhomologies in MSH2-deficient mice and an exonuclease 1 (EXO1) role in yeast microhomology-mediated end joining suggest that mismatch repair (MMR) proteins might influence A-EJ-mediated CSR. We have directly investigated whether MMR proteins collectively or differentially influence the A-EJ mechanism of CSR by analyzing CSR in mice deficient in both XRCC4 and individual MMR proteins. We find CSR is reduced and that Igh locus chromosome breaks are reduced in the MMR/XRCC4 double-deficient B cells compared with B cells deficient in XRCC4 alone, suggesting MMR proteins function upstream of double-strand break formation to influence CSR efficiency in these cells. Our results show that MLH1, EXO1, and MSH2 are all important for efficient A-EJ-mediated CSR, and we propose that MMR proteins convert DNA nicks and point mutations into dsDNA breaks for both C-NHEJ and A-EJ pathways of CSR. We also find Mlh1-XRCC4(-) B cells have an increased frequency of direct S junctions, suggesting that MLH1 proteins may have additional functions that influence A-EJ-mediated CSR.

Indexed as

Adaptor Proteins, Signal TransducingAnimalsB-Lymphocyte SubsetsCells, CulturedDeoxyribonucleases, Type II Site-SpecificDNA-Binding ProteinsDNA Breaks, Double-StrandedDNA DamageDNA RepairExodeoxyribonucleasesImmunoglobulin Class SwitchingMiceMice, KnockoutMice, TransgenicMutL Protein Homolog 1MutS Homolog 2 ProteinAdaptor Proteins, Signal TransducingDeoxyribonucleases, Type II Site-SpecificDNA-Binding Proteinsendodeoxyribonuclease NheIexodeoxyribonuclease IExodeoxyribonucleasesMlh1 protein, mouseMsh2 protein, mouseMutL Protein Homolog 1MutS Homolog 2 ProteinNuclear ProteinsXLF protein, mouseXRCC4 protein, mouse

Identifiers

PMID21242524
PMCPMC3072809
OpenAlexW2115941739

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.